Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5484g00019 ATGGCTAAGCCATATTCAAAGCATGCCTTAGGCTGCTTCATCTTTAGCTCCCTCATTATATCTTCTCTCTCACATTTACTTCCATCATTTACAGAGGATAGCGATCTTACATTAGGTTTTAATGTTGAAGTTGATGTTAATTTAACTTTTGCTCATAAAAGGCTTAAAAACGCCTATGTTGCTCTTCAAGCTTGGAAAAGTGCCATTTACTCTGACCCATTAAAAATACTTGACAATTGGGTGGGTTCCGATGTATGTTCTTATAATGGTGTGTTTTGTGCTGAAGCTCTTGATGATTCTAAATTAACCGTTGTTGCTGGAATAGATCTCAATCATGCAGACATTGCTGGTAATCTTGTACCAGAGTTAAGCCTCCTAACTGACATGGCTCTTTTCCATATCAACTCTAATAGGTTTTGTGGCATTATTCCAGAGAACTTTAAGAATCTCACTCTTATGTATGAGTTTGATATCAGCAACAATAGATTTGTTGGCACTTTTCCTTCTGTAGTCCTTACATGGCCAAACATAAAGTACCTAGATCTTAGGTTTAATAATTTTGAAGGACCTTTACCTCCACAACTATTTGAGAAAGATATCGATGCATTATTCTTGAACAATAATCGTTTCGGTTCAAGCATCCCAGAAACCCTAGGGAACTCTCCAGCCTCTGTCATAACATTTGCTAACAACAATTTCACAGGTTGCATTCCAAAATCAATTGGGAACATGGTGAACTTGAATGAGATTGTTTTCCTAAGCAACGGCCTTGGAGGTTGCTTCCCAACAGAGATGGGAATGTTAAGAAATGTGACAATCCTTGACGTCAGCCATAATGGTTTTGTTGGGACTTTGCCAAATTTTTCAAGTTTGAAGAGTGTGGAGGTAATAGACATTTCACATAATAAGATTGCTGGGTATGTGTCAGACACCATTTGCAAGCTACCAAGGTTGACCAAATTTGCATTCTCTGACAATTACTTCAATGGAGAAGCTCAATCTTGTATACCATCTTCAAGAACAAATGTTGTTTTCGATGACAGTAACAATTGTTTGCCATTAAGGTCAAATCAAAAGACAAGCAAGCAATGTCTCCCAATAGTGACTCGTCCTGTAGACTGTAGTAAGAGTTGTGGGAGTGGTGGTAATAATCATACCTCATTAACACCAAAAACACCAAGGGTAGAGCCACCAGTTCAATCTCTTCAACCTCCAATTCACTCTCCTCTACCTCCAGTCCAGTCTCCACCAACCCCATTTTATTCTCCGCCTTCACCCCAGGTTCACTCTCCTTTACCTCTAGTCCATTCTCCACCTCTACATGTGTTCTTCCCTTCACCCCCAATCCACTCTCCGCCTCCACTAGTGCACTCTCCTCCACCCCCACTCCAGTCTCCTCCGCCTCCACCTGTGCACTCTCTTCCACCCCCACTTCAGTCTCCTCTGCCTCCACCAATACACTCTCCTCCACCCCCAGTCCACTCTCCACCTCCACCCATGCACTCTCCTCCACCCCCGCTCCAGTCTCCTCCACCTCCACCTGTGCACTCTCCTCCACCCCCGCTCCAGTCTCCTCCACCTCCACCTGTGCACTCTCCTCCACCCCCACTCCAGTCTCCCCCGCCTCTACCTGTGCACTCTTCTCCGCCTCCACCAATGTTCTCTCCTCCATCCCCAACACAGTTTCCTCCACCTCCACTTGTGTTCTCTCGTCAGCCTCCACTCTACTCTCCACTGCCACTAATTCACTCTCCTCCAATCCAATCTCCACCCCCAATTCATTCTCCCCCACCCCCAATCCATTCTCCACCTCCACCTCCGCCTGTGTTTTCTCCTCCACCCCTAGTTCACTCTCCACCACCCCCAATCCAATCTCCACCTCCACCTATTTTCTCTCCCCCACCACCAACTAGCCCTCCTCCTCCTACTCCTATACTGTCTCCACCGCCACCAGCATGGAATGATGTCATCTTGCCCCCAACCTTTGGAGCACAATATAGTTCACCACCTCCACCAGCTATTATTGGATATTAA 2034 0.4558 MAKPYSKHALGCFIFSSLIISSLSHLLPSFTEDSDLTLGFNVEVDVNLTFAHKRLKNAYVALQAWKSAIYSDPLKILDNWVGSDVCSYNGVFCAEALDDSKLTVVAGIDLNHADIAGNLVPELSLLTDMALFHINSNRFCGIIPENFKNLTLMYEFDISNNRFVGTFPSVVLTWPNIKYLDLRFNNFEGPLPPQLFEKDIDALFLNNNRFGSSIPETLGNSPASVITFANNNFTGCIPKSIGNMVNLNEIVFLSNGLGGCFPTEMGMLRNVTILDVSHNGFVGTLPNFSSLKSVEVIDISHNKIAGYVSDTICKLPRLTKFAFSDNYFNGEAQSCIPSSRTNVVFDDSNNCLPLRSNQKTSKQCLPIVTRPVDCSKSCGSGGNNHTSLTPKTPRVEPPVQSLQPPIHSPLPPVQSPPTPFYSPPSPQVHSPLPLVHSPPLHVFFPSPPIHSPPPLVHSPPPPLQSPPPPPVHSLPPPLQSPLPPPIHSPPPPVHSPPPPMHSPPPPLQSPPPPPVHSPPPPLQSPPPPPVHSPPPPLQSPPPLPVHSSPPPPMFSPPSPTQFPPPPLVFSRQPPLYSPLPLIHSPPIQSPPPIHSPPPPIHSPPPPPPVFSPPPLVHSPPPPIQSPPPPIFSPPPPTSPPPPTPILSPPPPAWNDVILPPTFGAQYSSPPPPAIIGY 677
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5484g00019 677 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 19 672 - -
Pral5484g00019 677 MobiDBLite consensus disorder prediction 397 429 - -
Pral5484g00019 677 Pfam Leucine rich repeat N-terminal domain 59 93 IPR013210 -
Pral5484g00019 677 Gene3D Ribonuclease Inhibitor 57 222 IPR032675 -
Pral5484g00019 677 Gene3D Ribonuclease Inhibitor 223 365 IPR032675 -
Pral5484g00019 677 MobiDBLite consensus disorder prediction 454 652 - -
Pral5484g00019 677 MobiDBLite consensus disorder prediction 376 396 - -
Pral5484g00019 677 SUPERFAMILY L domain-like 59 350 - -
Pral5484g00019 677 PRINTS Pistil-specific extensin-like signature 581 604 IPR003882 -
Pral5484g00019 677 PRINTS Pistil-specific extensin-like signature 616 634 IPR003882 -
Pral5484g00019 677 FunFam Leucine-rich repeat extensin-like protein 1 59 220 - -
Pral5484g00019 677 MobiDBLite consensus disorder prediction 376 429 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5484g00019 Pral-Chr5484 119331 121364 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5484g00019 1 376 Trihelix Transcription Factor Family AT3G19020 60.154 2.77e-169 507
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5484g00019 - - lang:109330687 537.724