Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5484g00002 ATGTCTTCCTCCTCTGGCTCCGCCGACGCTGATCTCCCCTTGAAGCCTATCCCAGGTGGCTATGGCCTCCCTTTCATCGGAGCCGTTTGTGACAGATTCGACTTTTTCTACCTCCAAGGCAGTGACGACTTCTTCAGATCACGAATGCTCAAATACAAATCCACCGTCTTCAGAACCAACATGCCTCCTGGTCCTTTCATTTCTCCTAACTCTCGTGTCATCGCTTTACTTGACGCCGCTAGTTTCCCCGTCCTCTTCGACAACTCCAAGGTCGAGAAACGCGACGTCTTCACCGGAACTTTCAAGCCCTCCGCCGGATTCACCAATGGCTACCGTGTCTGCAACTACCTCGACCCATCCGAACCCAAGCACGACCAAATCAAGAGCTTCCTCCTTGCTCTCATCGCCTCGCGAAAAGACCAGGTAATCCCACTGCTCAGAAACTACTTGACAGAGCTGTTTATTAAGGTTGAAGACGAAGTATCTGGCCATGGAAAGGTTTACTTCAACCCCATCAGCCAAAACGAGCTCTTCAACTTCTTGTTTCACCTATACTGCGGCAAAGCACCAGTCCAAACCAAACTCAAATCTGATGGCTTGAAACTCTTCCAGCTCTGGGTGTTTGCTCAGGTTTTACCTCTTGGATCTCTGGGGTTGCCGTGGTACCTCTTCCCTCTCAGCGTGCTAGAAGATTTACTTCTCCATACTCTGCCGCTTCCCAGCTTCTTGCTGAAATGGGACCTAAACAAGCTTTACAATGCCGTCGAAACATCAGCTACGGAAGCGTTTGATTTAGCTTCGACTTTCGGCTTATCCAAAGACGAAGCCTGCATGAACTTGCTCTTCGTTCTGGGCTTCAACTCTTGCAACGGGATGAAGATCGTCATCCCCACCTTGATGAAGTGGGTCGGACTGGCCGGAAAGACCCTACACCAGAAAATCGCCGACGAAGTCCGGAGCGTCGTGAAAGAAGAAGGTGGGGTCACTTTGAAGGCGATGGAAAAGATGCCGTTGGTGAAGTCAGTGGTGTGGGAGTCGCTGAGGATTGAACCTCCGGTGGCGTACCAGTACGCGAAGGCCAAAGAGGACATTGTTGTCCGAAGTCACGACGCTGCGTTTTTGGTGAAGAAAGGAGAGACGCTGTTAGGGTTTCAGCCATTTGCAACGAAGGATGAAAAAGTTTTTAAGGATGCAGAGAGATTCGTGGAGGATAGGTTTATGGGAGAAGAAGGAGAGAAGCTGTTGAGGTACGTGTACTGGTCGAACGGGCGGGAGACAGAGGAGCCGGCGGCAGCGAACAAGCAATGTGCCGGGAAGAATCTGGTGGAGCTGGTTCTAAGGATATTTACGGCGGAGTTCTTCTTGAGGTATGATAGTTTCACGATAAAGCTGGGAAAGCCCACCTTGCAAGGTCCCACAGTTACCATAACTTCCCTGGTCAAAGCGTCAACCCTTTGA 1458 0.5069 MSSSSGSADADLPLKPIPGGYGLPFIGAVCDRFDFFYLQGSDDFFRSRMLKYKSTVFRTNMPPGPFISPNSRVIALLDAASFPVLFDNSKVEKRDVFTGTFKPSAGFTNGYRVCNYLDPSEPKHDQIKSFLLALIASRKDQVIPLLRNYLTELFIKVEDEVSGHGKVYFNPISQNELFNFLFHLYCGKAPVQTKLKSDGLKLFQLWVFAQVLPLGSLGLPWYLFPLSVLEDLLLHTLPLPSFLLKWDLNKLYNAVETSATEAFDLASTFGLSKDEACMNLLFVLGFNSCNGMKIVIPTLMKWVGLAGKTLHQKIADEVRSVVKEEGGVTLKAMEKMPLVKSVVWESLRIEPPVAYQYAKAKEDIVVRSHDAAFLVKKGETLLGFQPFATKDEKVFKDAERFVEDRFMGEEGEKLLRYVYWSNGRETEEPAAANKQCAGKNLVELVLRIFTAEFFLRYDSFTIKLGKPTLQGPTVTITSLVKASTL 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5484g00002 485 SUPERFAMILY Cytochrome P450 13 465 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral5484g00002 485 Gene3D Cytochrome P450 12 484 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral5484g00002 485 PANTHER CYTOCHROME P450 26 13 460 - -
Pral5484g00002 485 Pfam Cytochrome P450 310 467 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral5484g00002 485 CDD CYP74 46 477 - -
Pral5484g00002 485 PRINTS E-class P450 group IV signature 389 407 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral5484g00002 485 PRINTS E-class P450 group IV signature 336 352 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral5484g00002 485 PRINTS E-class P450 group IV signature 373 387 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral5484g00002 485 PRINTS E-class P450 group IV signature 436 454 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral5484g00002 485 FunFam Allene oxide synthase, chloroplastic 12 484 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5484g00002 Pral-Chr5484 25340 26882 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5484g00002 1 483 Cytochrome P450 AT5G42650 50.620 9.22e-167 479
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5484g00002 K01723 - qsa:O6P43_027165 568.155