Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5484g00001 ATGTCTTCTTCTTCATCATCAGAATCTAACAATCTCCCACTGAAACCAATTCCGGGATCCTATGGCTCTCCATTCTTCGGAGCCATCGCAGACCGACGCGACTTCTTCTACAACCTCGGCCGCGAAAAGTTCTTCACTTCCAAAATCGAGAACTATCAATCCACGGTGTTCCGAACCAACATGCCTCCCGGTCCGTTCATCGCTTCCGATCCAAGAGTCGTCGCCGTCCTTGACGCCGTCAGCTTCCCCATCCTCTTTGATGTCTCCCAAGTGGAGAAACGCGACCTCTTCACCGGAACCTACATGCCGTCCACCGCCCTCACCGGCGGCTACCGCGTCTGCTCCTACCTTGACCCCTCCGAACCTAAGCACGCCCTCATCAAGCGCTTCCTTTTCTCCCTCCTCGCAGCTCGTCACGACAAGGTACTGCCACTGCTTAAAAGCTCCTTGTACAAGATTTTTATGAAACTGGAACAAGATATCTCAGCTGAAGGCGAAGCAGACTTCAACACCATCAGCGACAACGAATCCTTCAACTTCGTGTTCAAGCTCTTTTGCGGGGTAGACCCGAACCAGACCAAGCTCGGGTCGAAGGGTCCAAAACTGATCCAGAACTGGCTGGTAGCTCAGCTCGCTCCTATTGTAACCCTAGGCCTTCCAAAATTCTTGAGCCTAGCTGAAGATCTCCTGCTTCACACCTTTCCCATTCCGCCCTTTCTGGTCAAGTCGGCCTACAACAAAGTCTACAACGCCGTTTCCGGGTCTGCGACGGAGGCACTGGACGAAGCGGTGCGTTTAGGGCTTCAAAGAGAAGAGGCGGCTCATAACTTGGTTTTTGTTTTAGGGTTCAACACCTTCGGAGGGGTCAAGGTTATGTTCCCCAGCATCATGAAGTGGGTCGGATTAGCCGGGGAGGGTCTACACAAGAAGCTCGCCGACGAGATCAGGACCGTCGTTAAAGCGGACGGGGGTCTTACACTTGGATCGTTGGACAAGATGACTTTGACAAAATCAGTGGTGTGGGAGGCTCTGAGGATTGAGCCGCCGGTTCCGTTCCAGTACGCGAAGGCCAAGAAGGATATCATGATCCAGAGCCATGACGCGAGGTTTGAGATCAAGAAAGGAGAGATGATATTCGGGTATCAGCCGTTGGCAACGAGGGACCCGAAGGTGTTTGAGAGGGCAGATGTGTTCGTGGCAGATAGGTTTGTGGGGGAAGAAGGGGAGAAACTGTTGAAGTACGTGTGCTGGTCGAATGGGCGCGAAAAAGAGGATCCAAGCACCGAGAACAAGCAGTGTGCTGGGAAGAATCTGGTGGTGATGTTGGGAAGGTTATTGCTGGTAGAATTCTTCTTGCAGTATGACAGTTTCAGTATTGAAGAGAAAACGCCTGTTCTTGGACCAGCCATTGCCATTAAGTCGTTGATCAAGGCCAAAAGCGTCTAA 1446 0.5201 MSSSSSSESNNLPLKPIPGSYGSPFFGAIADRRDFFYNLGREKFFTSKIENYQSTVFRTNMPPGPFIASDPRVVAVLDAVSFPILFDVSQVEKRDLFTGTYMPSTALTGGYRVCSYLDPSEPKHALIKRFLFSLLAARHDKVLPLLKSSLYKIFMKLEQDISAEGEADFNTISDNESFNFVFKLFCGVDPNQTKLGSKGPKLIQNWLVAQLAPIVTLGLPKFLSLAEDLLLHTFPIPPFLVKSAYNKVYNAVSGSATEALDEAVRLGLQREEAAHNLVFVLGFNTFGGVKVMFPSIMKWVGLAGEGLHKKLADEIRTVVKADGGLTLGSLDKMTLTKSVVWEALRIEPPVPFQYAKAKKDIMIQSHDARFEIKKGEMIFGYQPLATRDPKVFERADVFVADRFVGEEGEKLLKYVCWSNGREKEDPSTENKQCAGKNLVVMLGRLLLVEFFLQYDSFSIEEKTPVLGPAIAIKSLIKAKSV 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5484g00001 481 Gene3D Cytochrome P450 12 480 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral5484g00001 481 FunFam Allene oxide synthase, chloroplastic 12 480 - -
Pral5484g00001 481 PRINTS E-class P450 group IV signature 386 404 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral5484g00001 481 PRINTS E-class P450 group IV signature 433 451 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral5484g00001 481 PRINTS E-class P450 group IV signature 370 384 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral5484g00001 481 PRINTS E-class P450 group IV signature 333 349 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral5484g00001 481 Pfam Cytochrome P450 308 454 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral5484g00001 481 SUPERFAMILY Cytochrome P450 13 463 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral5484g00001 481 CDD CYP74 47 473 - -
Pral5484g00001 481 PANTHER CYTOCHROME P450 26 12 454 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5484g00001 Pral-Chr5484 11321 13169 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5484g00001 1 478 Cytochrome P450 AT5G42650 54.071 0.0 538
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5484g00001 K01723 - qsa:O6P43_011643 652.899