Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pral5482g00003 | ATGTCTTTCTCCAATCGATCGAAGCTCACCGGAACTCCGATGGCGTCCACCTCCACTCATCCGCCGCCTAACTTCTTCTACAACGACCACGAACACTCCGTCATCGTTGAGGCACTCACCAATGTCGTCGTCGGTTCCACCGGCACTATCACGGCCACCACCTCCGGCGATGTCATCCAAGAAATTCGATTTCCTCCTACCTTTGAGTACTCCGGTGCAGTATCCGCCACCGCCTCCTCCCCAATCGGAATTGTTCCGACCATGAGCGTTGTCGAGACTTGCGGAGAATGCAAAATCGAAGGGTGCTTAGGTTGCAAATTTTTTCCCGAGGAGAAAAAGAAAAGTGGAGCGAAAAAGAAGGCGGCGACGTCGTCGTCGAAGAAGAAGAAGTACAGAGGAGTGCGACAGAGGCCCTGGGGAAAATGGGCAGCCGAGATCCGAGACCCGAGAAGGGCGACCCGGGTTTGGTTGGGGACGTTCAATACCGCAGAGGAAGCCGCACGCGCATACGATAATGCGGCCATTGAATTTCGCGGGCCGCGAGCGAAGCTCAATTTCCCGTTTCCCGATAACTCACTGAGTGATTCGCATTCCCAAACAGAGCAGCATTTGGAAGCAGAACGCTCAGAGTCCGTGTTGCGGCAAGCAGAGGAAGGAAATAGAAACTCAAATACTGGGAATTATTATGACGATGTTTGGACTATGGGAATTGGGAGTAGCAAGGAAAATGAATTCTTGGATGGACTTGGAGACCCTGAATTTCAACACTGGTTGAAAATGATGATGGATTTTGGAGGAGATTCCTCGGACTCTGCTACCATGAATAGCCAGAGTCCTCATAGTTGGTGA | 849 | 0.5159 | MSFSNRSKLTGTPMASTSTHPPPNFFYNDHEHSVIVEALTNVVVGSTGTITATTSGDVIQEIRFPPTFEYSGAVSATASSPIGIVPTMSVVETCGECKIEGCLGCKFFPEEKKKSGAKKKAATSSSKKKKYRGVRQRPWGKWAAEIRDPRRATRVWLGTFNTAEEAARAYDNAAIEFRGPRAKLNFPFPDNSLSDSHSQTEQHLEAERSESVLRQAEEGNRNSNTGNYYDDVWTMGIGSSKENEFLDGLGDPEFQHWLKMMMDFGGDSSDSATMNSQSPHSW | 282 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pral5482g00003 | 282 | Gene3D | AP2/ERF domain | 129 | 188 | IPR036955 | GO:0003700|GO:0006355 | |
Pral5482g00003 | 282 | PANTHER | DNA-BINDING DOMAIN | 112 | 217 | IPR044808 | GO:0003700|GO:0009873 | |
Pral5482g00003 | 282 | SUPERFAMILY | DNA-binding domain | 130 | 188 | IPR016177 | GO:0003677 | |
Pral5482g00003 | 282 | SMART | rav1_2 | 130 | 193 | IPR001471 | GO:0003700|GO:0006355 | |
Pral5482g00003 | 282 | MobiDBLite | consensus disorder prediction | 200 | 215 | - | - | |
Pral5482g00003 | 282 | ProSiteProfiles | AP2/ERF domain profile. | 130 | 187 | IPR001471 | GO:0003700|GO:0006355 | |
Pral5482g00003 | 282 | FunFam | Ethylene-responsive transcription factor 2 | 129 | 188 | - | - | |
Pral5482g00003 | 282 | MobiDBLite | consensus disorder prediction | 1 | 23 | - | - | |
Pral5482g00003 | 282 | Pfam | AP2 domain | 130 | 179 | IPR001471 | GO:0003700|GO:0006355 | |
Pral5482g00003 | 282 | CDD | AP2 | 129 | 187 | IPR001471 | GO:0003700|GO:0006355 | |
Pral5482g00003 | 282 | PRINTS | Ethylene responsive element binding protein signature | 131 | 142 | IPR001471 | GO:0003700|GO:0006355 | |
Pral5482g00003 | 282 | PRINTS | Ethylene responsive element binding protein signature | 153 | 169 | IPR001471 | GO:0003700|GO:0006355 | |
Pral5482g00003 | 282 | MobiDBLite | consensus disorder prediction | 188 | 228 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pral5482g00003 | Pral-Chr5482 | 48220 | 49275 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pral5482g00003 | 4 | 196 | AP2-EREBP Transcription Factor Family | AT4G34410 | 40.909 | 2.32e-31 | 115 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | AP2 or ERF-ERF | Pral5482g00003 | AP2 | 5.6e-16 | CL0081 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pral5482g00003 | - | - | pcin:129293970 | 438.728 |