Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5480g00010 ATGGGTCTATTGTCAAATCATAGAGGCTCAAGAACAGAGACAAACCAGGAAACTTTACCGGTTTCCACAGCTGGTTTATCGGTGCCGCCCAAGAAGAGATGGTCCAATCTAATGCCGCTGTTCGTGGCCCTTGTGGTCATAGCAGAGATCGCCTTCTTGGGTAAGTTGGATGTGGCGAAGAACACAGTTATGGTCGATACGTGGGCGGACTTAATTTACTGGTCTCCTGAAGTCGTACCAAAAGATGATTTGGGAATAGCTCATGAAGTCGTACCAAAAGATGATCTGGGGGTAGATATGCTGGGTAGGGGTCGGAGTTCAGAATCTGAGAGCTGTGAGGAGTGGTTAGAGAGGGAGGATGCTGTGACGTATTCAAGGAACTTCACAAAGGAACCTATTTTGGTTAATGGAGCTGAGCAGGAGTGGAAATCTTGTGCCGTTGGATGCAACTTTGGTTATAATTCAGGTATCAAACCTGATGCAGCATTTGGCATACCTCAGCAAGGTGGAACGGCTAGTGTTCTGCGATCTATGGAATCTTCGCAATACTATGCAGAGAACAATATGGCAATGGCAAGACGGAGGGGATATCACATTGTAATGACAACCAGTCTATCATCTGATGTTCCTGTTGGATATTTCTCTTGGGCTGAGTATGACATTATGGGACCTGTACAACCGAAAACTGAAAGTGCCCTTGCAGCTGCTTTCATTTCCAATTGTGGTGCTCGAAATTTCCGGTTGCAAGCTCTTGAGGGTCTTGAAAAAGCAAACATCAAGATTGATTCTTATGGTGGTTGCCATAGAAACCGTGATGGAAGAGTGGACAAAGTGGAAACCCTGAAGCACTACAAATTTAGCTTGGCATTTGAGAATTCAAATGAGGAGGATTATGTAACTGAAAAATTCTTCCAATCTCTTGTTGCTG 928 0.4472 MGLLSNHRGSRTETNQETLPVSTAGLSVPPKKRWSNLMPLFVALVVIAEIAFLGKLDVAKNTVMVDTWADLIYWSPEVVPKDDLGIAHEVVPKDDLGVDMLGRGRSSESESCEEWLEREDAVTYSRNFTKEPILVNGAEQEWKSCAVGCNFGYNSGIKPDAAFGIPQQGGTASVLRSMESSQYYAENNMAMARRRGYHIVMTTSLSSDVPVGYFSWAEYDIMGPVQPKTESALAAAFISNCGARNFRLQALEGLEKANIKIDSYGGCHRNRDGRVDKVETLKHYKFSLAFENSNEEDYVTEKFFQSLVA 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5480g00010 309 Pfam Glycosyltransferase family 10 (fucosyltransferase) C-term 231 307 IPR001503 GO:0006486|GO:0008417|GO:0016020
Pral5480g00010 309 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 117 309 - -
Pral5480g00010 309 PANTHER ALPHA- 1,3 -FUCOSYLTRANSFERASE 111 308 IPR001503 GO:0006486|GO:0008417|GO:0016020
Pral5480g00010 309 MobiDBLite consensus disorder prediction 7 23 - -
Pral5480g00010 309 MobiDBLite consensus disorder prediction 1 25 - -
Pral5480g00010 309 Gene3D - 176 309 IPR038577 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5480g00010 Pral-Chr5480 83330 86363 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5480g00010 1 309 Xyloglucan Fucosyltransferase1 AT1G49710 61.587 3.33e-130 379
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5480g00010 K00753 - gmx:100776065 452.21