Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5480g00005 ATGGCATCCTCCGTCTGCTCAGACCAAGGTGACAGAAATGGCTGTTGTCGCTACATTAATGCTAATATTGCCGTTTCTGTTGCTCGATATGCAAATGGAACAGGCAACCTTGGAGTCCCTCCAGATGCTTCTGACTTCTGCCTCCAGACCATAACTGAGACTTTGCAACTTTATGGAGTTTCACCAAATGCAGCTGTTTTCTGTGGCTTTGGGACAAAAGTCCCGGTTAATTACGAGTGTAAAGGTCGAACTACTGTCACACAGATGCTGCAATCTCCAAGATTTGGAGAGGTCACTAAAAATTGCAAAGTGCCTCTTGTAAAGGAAAGTGATTGCAAGCAATGTTTGAATGCTGCCATTGGTTACCTACATAATGTAATAGGTGTACAGGATAATATCACATTAAGTACATGCCGTGATGCCACTTTTACTGCGTTGGCAAGCCAAGTTGATGATATGTCTACTGTTGAAACTGCGAGCTGTTTCTTTGGGGTTCAAGGACTTCTCGGGCCTACTGGTATGAATGTTTCAGAGCCATCCACTTCACCAACTCCTGAGGCTTCTCCAAGTCCTCCAGCTGCTGATAGCCCAAGTCCATTGCTGATAGGTGTACCACTTAAAAGAAATCACCATAGATACCACTTGACATTAATCCCAGGTATCGGTATTGCCGTCACAGCTGCTGCGGTTATGATGCTTGTAGTTTTGGTCGTTTTAATTCGTCAAAAAGGCAGAGAGCTAGAGGGACCTGATCATTTAAGTAAAACCTCCTCGAAATCCTTACCCCCTTCTGCCACATGGAGATTTCAGGATGGTCCTTCGTCTACGTTTCGAAAATTCAACTATAGCGAGATTAAGAGGGCCACAGATAATTTTGGCACTGTGATTGGGCAAGGAGGATTTGGAACTGTGTATAAAGCTGATTTTAGTGATGGTTTAGTGACAGCAGTAAAGCGTATGGATAAATCAGCAGAGCAAAAGGGGGATGAGTTTTGTAGAGAAATAGAGCTTGTTGCCCGGCTTCATCACCGCCATCTAGTTGCATTAAGAGGATTTTGCATTAAAAAACATGAGAGGTTTCTGATATACGAGTACATGGAAAATGGAAGCTTGAAAGACCATCTTCATTCCCCTGGGAAAACGCCCCTGAGTTGGCGAAATAGAATCCAAATTGCCATTGACGTGGCTAATGCACTGGACTACCTTCATTTCTATTGCGATCCTCCTCTCTGCCACAGAGACATTAAATCTAGCAACATTTTACTGGATGAGAAATTTGTTGCAAAGCTAGCTGATTTCGGACTGGCACACGCTTCAAAATATGGTTCTATATGCTTTGAACCAGTAAATACTGATATCCGGGGAACTCCAGGTTATATGGATCCAGAATATGTTGTTACTCAAGAACTCACCGAGAAAAGTGATATTTACAGTTTTGGTGTGCTATTATTAGAGATTGTAACTGGAAGACGAGTAATTCAAGATAATAAGAATTTGGTAGAATGGGCACAACCATTCATGGAATCCGAATCAAGATTGATGGAGTTAGTGGATCCCAATGTGAGGGAATCTTTTGATTTGGATCAGCTCCAAACAGTTGTCTCTATAGTAGGATGGTGCACCCAGAGAGAAGGCAGGGCAAGGCCTTCAATAAAACAAGTCCTTAGACTTCTGTATGAGACTTCAGAACCCATGCACAGTGGATTTTTACAAGCTGTTGAAGATGAAGAATATGCAGCAAATCAGCAATCTGGCAGAAGAAGCAAGGGAAAGTTACACAGAAGTGAATCAAATTATCACAGTGGGGATGGAAGATATTTAGCTTCTTCTTCAAGTACATCCAGGTCCTATTGCAGTAGAAGTTTCTTACTTGAGACAGGATCCCCGCAGTCCCCTCAGAATATTTTTTCAGTTTAA 1917 0.4241 MASSVCSDQGDRNGCCRYINANIAVSVARYANGTGNLGVPPDASDFCLQTITETLQLYGVSPNAAVFCGFGTKVPVNYECKGRTTVTQMLQSPRFGEVTKNCKVPLVKESDCKQCLNAAIGYLHNVIGVQDNITLSTCRDATFTALASQVDDMSTVETASCFFGVQGLLGPTGMNVSEPSTSPTPEASPSPPAADSPSPLLIGVPLKRNHHRYHLTLIPGIGIAVTAAAVMMLVVLVVLIRQKGRELEGPDHLSKTSSKSLPPSATWRFQDGPSSTFRKFNYSEIKRATDNFGTVIGQGGFGTVYKADFSDGLVTAVKRMDKSAEQKGDEFCREIELVARLHHRHLVALRGFCIKKHERFLIYEYMENGSLKDHLHSPGKTPLSWRNRIQIAIDVANALDYLHFYCDPPLCHRDIKSSNILLDEKFVAKLADFGLAHASKYGSICFEPVNTDIRGTPGYMDPEYVVTQELTEKSDIYSFGVLLLEIVTGRRVIQDNKNLVEWAQPFMESESRLMELVDPNVRESFDLDQLQTVVSIVGWCTQREGRARPSIKQVLRLLYETSEPMHSGFLQAVEDEEYAANQQSGRRSKGKLHRSESNYHSGDGRYLASSSSTSRSYCSRSFLLETGSPQSPQNIFSV 638
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5480g00005 638 MobiDBLite consensus disorder prediction 184 198 - -
Pral5480g00005 638 FunFam Putative receptor-like protein kinase 366 566 - -
Pral5480g00005 638 Gene3D Transferase(Phosphotransferase) domain 1 366 584 - -
Pral5480g00005 638 SUPERFAMILY Protein kinase-like (PK-like) 271 561 IPR011009 -
Pral5480g00005 638 MobiDBLite consensus disorder prediction 173 201 - -
Pral5480g00005 638 Pfam Protein kinase domain 294 556 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5480g00005 638 SMART serkin_6 290 558 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5480g00005 638 MobiDBLite consensus disorder prediction 581 611 - -
Pral5480g00005 638 Pfam SPARK 3 126 IPR043891 -
Pral5480g00005 638 Gene3D Phosphorylase Kinase; domain 1 268 365 - -
Pral5480g00005 638 FunFam Putative receptor-like protein kinase 258 365 - -
Pral5480g00005 638 ProSitePatterns Protein kinases ATP-binding region signature. 296 318 IPR017441 GO:0005524
Pral5480g00005 638 ProSitePatterns Serine/Threonine protein kinases active-site signature. 410 422 IPR008271 GO:0004672|GO:0006468
Pral5480g00005 638 CDD STKc_IRAK 296 558 - -
Pral5480g00005 638 ProSiteProfiles Protein kinase domain profile. 290 569 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5480g00005 638 PANTHER OS01G0750732 PROTEIN 117 584 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5480g00005 Pral-Chr5480 49713 53498 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5480g00005 1 637 Receptor kinase-like Gene Family AT3G19300 59.781 0.0 748
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_URK-1 Pral5480g00005 Pkinase 3.2e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5480g00005 - - ahf:112715638 979.933