Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5475g00025 ATGATGGCGAAGGACAAAATGAAGAACAATAACAGTAATACTAAGAGCAAGCTGAGGAAAGGGCTGTGGTCGCCGGAGGAAGACGAGAAGCTGATGAGGTACATGGTGACGAATGGACAAGGTTGTTGGAGTGACATTGCCAGAAACGCTGGACTTCTTCGTTGTGGCAAAAGTTGTCGGCTGCGTTGGATCAATTACCTCAGACCTGACCTCAAACGTGGTGCTTTTTCCCTTCATGAGGAACACCTCATCATTCATCTTCACTCTCTCCTTGGCAACAGATGGTCTCAGATTGCTGCGCGTCTTCCTGGAAGAACAGACAATGAGATTAAGAATTTCTGGAACTCTACATTGAAGAAAAGGTTCAAAAATAACAACACTTCCTCATCTTCATCACCAAACAACTCATCATCCTCGACATCCTCATCATCAGACCCTAAAAATCATGTCCTGATCAGTGGAAACTCATCAAGCATGATCGACCCATTAATGCCCATGAACTTCTCTAATTCCTCCACGTCATCCTCCTTGTCCATGCAAGTCCCCATCATCTTCGGAGATCAATTAGTTTCCGATACCTTTTTCACGTTGAATCATCATCTTGACACGAACAATGTCGAAGGAGCTGGTAATTTTCCTTTATCTGCAGAACTCGGCGACATAGAAGAAGGGCTTTATAATAATAATGGACATTATGGGACAACATTACTACAGCCTAGTTGCAACCTGGAAGGTGGTCGTGGAGGCAATATCGAGGTCCCAAATTTTCATGATCTTAGTGTGAAAAGCCACTACAACAACTTCAATAATAGTTGCTTCAATTACACTAATGATCATCATCAAATGATTCAGAGCTCAAGTAGAGTAGAGGGAGAGGGCATGTTTGGGTTAGGAAATAGCAATAAGATCATCAATAATCATACTGTTATTAATGAGCATCACTTAGGAGATCAAAACCTAGTGGGAGATCAATGGGATTTGGAAGATCTGATGCAAGATATGTCTTCTTTTCCCTTCCACGATTTTTCCAAGTTAGTCGAATAA 1044 0.4195 MMAKDKMKNNNSNTKSKLRKGLWSPEEDEKLMRYMVTNGQGCWSDIARNAGLLRCGKSCRLRWINYLRPDLKRGAFSLHEEHLIIHLHSLLGNRWSQIAARLPGRTDNEIKNFWNSTLKKRFKNNNTSSSSSPNNSSSSTSSSSDPKNHVLISGNSSSMIDPLMPMNFSNSSTSSSLSMQVPIIFGDQLVSDTFFTLNHHLDTNNVEGAGNFPLSAELGDIEEGLYNNNGHYGTTLLQPSCNLEGGRGGNIEVPNFHDLSVKSHYNNFNNSCFNYTNDHHQMIQSSSRVEGEGMFGLGNSNKIINNHTVINEHHLGDQNLVGDQWDLEDLMQDMSSFPFHDFSKLVE 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5475g00025 347 MobiDBLite consensus disorder prediction 1 20 - -
Pral5475g00025 347 FunFam MYB transcription factor 17 73 - -
Pral5475g00025 347 ProSiteProfiles Myb-like domain profile. 68 118 IPR001005 -
Pral5475g00025 347 SMART sant 72 120 IPR001005 -
Pral5475g00025 347 SMART sant 19 69 IPR001005 -
Pral5475g00025 347 ProSiteProfiles Myb-like domain profile. 15 67 IPR001005 -
Pral5475g00025 347 Pfam Myb-like DNA-binding domain 73 117 IPR001005 -
Pral5475g00025 347 Pfam Myb-like DNA-binding domain 20 67 IPR001005 -
Pral5475g00025 347 MobiDBLite consensus disorder prediction 1 19 - -
Pral5475g00025 347 Gene3D - 17 73 - -
Pral5475g00025 347 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 72 122 IPR017930 -
Pral5475g00025 347 CDD SANT 75 118 IPR001005 -
Pral5475g00025 347 Gene3D - 74 149 - -
Pral5475g00025 347 SUPERFAMILY Homeodomain-like 18 114 IPR009057 -
Pral5475g00025 347 MobiDBLite consensus disorder prediction 124 151 - -
Pral5475g00025 347 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 15 71 IPR017930 -
Pral5475g00025 347 PANTHER MYB DOMAIN PROTEIN 55 12 285 - -
Pral5475g00025 347 CDD SANT 23 67 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5475g00025 Pral-Chr5475 427948 429740 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5475g00025 4 342 MYB Transcription Factor Family AT3G08500 46.910 6.96e-78 241
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Pral5475g00025 Myb_DNA-binding 2.4e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5475g00025 K09422 - qsu:112038777 268.855