Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5475g00019 ATGGAGGTACATTACATAGATACGGGCTTTCCTTACACTGTTACTGAAAGCTTCATGGACTTCTTTGAAGGCCTCACGTATGTGCCATCGAATTGTCTCCACCCCGGCTCCGTGCCTGATCAGGAATGTGCCAACTGGATGATGAATATGAGCCCATATAAATATGAAATGTCTGGCCCTTTGTGTCCATCTTATTTTGGTTATCCTGAATATACCTTTCCCTTACCAAGGATGGAGGTCAACAGGGGACAGTGGGAAAGCCCTTCAACGGTGACCGTTGAGGAGCCTGCCACAACAGACTCTTTGTCCAGAAGAGATGGAGTCGCTGGCATGCAGACTATTCCTGAAGAATGCAGCCCTAATCATCAAGATTTCCGTGGTACTCAGGTTGTATGGCAGCAAGACGGCATTGATCCCGATAATATGACTTATGAGGAACTACTGGACTTGGGCGAGGCAGTTGGAACTCAAAGCAGAGGCCTCTCCAAAGAACTGATTGATTTGCTTCCAGTCTCAAAATACAATTTTAGAAGCATGTTTAAAAGGAAAAATTATGGGAAAAGGTGTGTGATTTGTCAGATGACCTACAAAAGAGGTGACCAACAAATGAAATTGCCATGCACGCACGTTTACCATAGTGAATGCATCTCCAAATGGCTTAGCATTAACAAGAAGTGCCCAGTTTGCAACACTGAGGTGTTTGGAGAGCATTCAAGGAATCGGCATTAA 729 0.4472 MEVHYIDTGFPYTVTESFMDFFEGLTYVPSNCLHPGSVPDQECANWMMNMSPYKYEMSGPLCPSYFGYPEYTFPLPRMEVNRGQWESPSTVTVEEPATTDSLSRRDGVAGMQTIPEECSPNHQDFRGTQVVWQQDGIDPDNMTYEELLDLGEAVGTQSRGLSKELIDLLPVSKYNFRSMFKRKNYGKRCVICQMTYKRGDQQMKLPCTHVYHSECISKWLSINKKCPVCNTEVFGEHSRNRH 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5475g00019 242 Pfam Ring finger domain 188 230 IPR001841 -
Pral5475g00019 242 SMART ring_2 189 229 IPR001841 -
Pral5475g00019 242 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 1 236 IPR033276 GO:0004842|GO:0016567|GO:0046621
Pral5475g00019 242 FunFam E3 ubiquitin ligase BIG BROTHER 151 234 - -
Pral5475g00019 242 ProSiteProfiles Zinc finger RING-type profile. 189 230 IPR001841 -
Pral5475g00019 242 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 151 234 IPR013083 -
Pral5475g00019 242 SUPERFAMILY RING/U-box 188 234 - -
Pral5475g00019 242 MobiDBLite consensus disorder prediction 86 106 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5475g00019 Pral-Chr5475 354749 359370 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5475g00019 2 238 C3H Transcription Factor Family AT3G63530 51.261 2.72e-81 242
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5475g00019 K19045 - gmx:100785290 356.681