Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5475g00008 ATGGTTCAGATTCAGAAAACGGAGAAGGAAGAGACCGAGTTCAAGGTTCCTGAAACCATCACCCCCTGCGTTAACAACTGCGGGGTTACCGGTAATCCGGCCAACAATAATATGTGCCAGAAGTGCTTCACCACCACAGCCGCTGCCGCCTCGTCAGCGACGACCTCCTCTACCGGGATTTCTCCTCCTCCTAAATTTTCCGACGACAAAAGTTCTAGATCCGCCCCTTCCCGCTCGCCCAAGAGGTCGCACCCTTCCGAGGAGGAGCCGACGCAGAATCTATTATCAGATCGGACGAAATCGGACGACACGACGCCGTCTGAAGCCAAACGGGTGGTGAATCGATGCTCTGGATGCCGAAGGAAGGTCGGTTTGACCGGATTCCGATGCCGGTGCGGCGAGTTGTTCTGCGCTGAGCACCGGTACTCCGATCGACACGACTGCAGCTACGACTACAAAGCCGCCGGACGCGAGGCGATCGCGAGGGAAAATCCGGTGGTAAAAGCGGCGAAGATTGTGAAGGTTTGA 528 0.5625 MVQIQKTEKEETEFKVPETITPCVNNCGVTGNPANNNMCQKCFTTTAAAASSATTSSTGISPPPKFSDDKSSRSAPSRSPKRSHPSEEEPTQNLLSDRTKSDDTTPSEAKRVVNRCSGCRRKVGLTGFRCRCGELFCAEHRYSDRHDCSYDYKAAGREAIARENPVVKAAKIVKV 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5475g00008 175 MobiDBLite consensus disorder prediction 52 70 - -
Pral5475g00008 175 MobiDBLite consensus disorder prediction 52 107 - -
Pral5475g00008 175 ProSiteProfiles Zinc finger AN1-type profile. 110 156 IPR000058 GO:0008270
Pral5475g00008 175 PANTHER AN1-TYPE ZINC FINGER PROTEIN 21 174 - -
Pral5475g00008 175 FunFam Zinc finger AN1-type containing 6 88 171 - -
Pral5475g00008 175 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 23 56 - -
Pral5475g00008 175 ProSiteProfiles Zinc finger A20-type profile. 17 51 IPR002653 GO:0003677|GO:0008270
Pral5475g00008 175 Pfam A20-like zinc finger 22 43 IPR002653 GO:0003677|GO:0008270
Pral5475g00008 175 SMART AN1_Zf_4 116 153 IPR000058 GO:0008270
Pral5475g00008 175 MobiDBLite consensus disorder prediction 71 107 - -
Pral5475g00008 175 Gene3D - 7 90 - -
Pral5475g00008 175 SMART A20_3 20 44 IPR002653 GO:0003677|GO:0008270
Pral5475g00008 175 SUPERFAMILY AN1-like Zinc finger 100 169 IPR035896 -
Pral5475g00008 175 Gene3D - 91 161 IPR035896 -
Pral5475g00008 175 Pfam AN1-like Zinc finger 116 153 IPR000058 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5475g00008 Pral-Chr5475 35574 36587 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5475g00008 10 175 C2H2 Transcription Factor Family AT3G52800 38.953 3.22e-31 109
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5475g00008 - - adu:107463072 239.195