Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5475g00005 ATGGTAGAAAAGACGGCAAAGGGGAGAAAGGAGGAGGTCGTTACCAGAGAGTACACCATCAACCTCCACAAGCGCTTGCATGGATGCACATTCAAAAAGAAGGCTCCAAAGGCAATAAAGGAAATTAGGAAGTTTGCTCAGAAGGCTATGGGAACAACCGATGTGAGGGTGGATGTCAAGCTTAACAAGCATGTCTGGAGTGGTGGAATCCGCAGTGTCCCAAGGAGAATTCGTGTCCGCGTAGCCCGAAAGAGAAATGATGAAGAAGATGCCAAGGAAGAGTTCTACTCATTAGTCACTGTTGTAGACATCCCAAGAGAAGAATTGAAAGGTTTGGGCACGAAGCTGATTGATGAAGAGGATTAA 366 0.4617 MVEKTAKGRKEEVVTREYTINLHKRLHGCTFKKKAPKAIKEIRKFAQKAMGTTDVRVDVKLNKHVWSGGIRSVPRRIRVRVARKRNDEEDAKEEFYSLVTVVDIPREELKGLGTKLIDEED 121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5475g00005 121 Gene3D - 10 121 IPR023621 -
Pral5475g00005 121 CDD Ribosomal_L31e 10 93 IPR000054 GO:0003735|GO:0005840|GO:0006412
Pral5475g00005 121 FunFam 60S ribosomal protein L31 7 120 - -
Pral5475g00005 121 Pfam Ribosomal protein L31e 12 93 IPR000054 GO:0003735|GO:0005840|GO:0006412
Pral5475g00005 121 PANTHER 60S RIBOSOMAL PROTEIN L31 2 119 IPR000054 GO:0003735|GO:0005840|GO:0006412
Pral5475g00005 121 SMART Ribosomal_L31e_2 11 94 IPR000054 GO:0003735|GO:0005840|GO:0006412
Pral5475g00005 121 SUPERFAMILY Ribosomal protein L31e 12 93 IPR023621 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5475g00005 Pral-Chr5475 21561 23283 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5475g00005 7 121 Cytoplasmic Ribosomal Protein Gene Family AT4G26230 83.478 3.54e-67 196
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5475g00005 K02910 - pvy:116116185 203.756