Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5474g00028 ATGGGAGAAGGAAGTGATGAAGTGGTGGCTTCTTCTTCGCCTCTTCATATGGAAGCTTCATTGCTATTTCCATCCAAAGGCATAGAGATTGACTTCAATGACATGATAGGTGAGAAAAATATTACCACGAAGAGGTTCATGTTTAGTGAAAATAGCTTGTGCAGGCTACAAGAAGACATTTCAAGAGATTGCGTCTTTAAGCCTACTAGAGTTGAAGCTGTGACAGCCTTGATATGGAAATCAGCCTTGGAAGCTGCAAGAACCACAGAGGCAACTCATAATGGTAGTTCATTGATGTTACATGCTGTGAACATACGAGGCCGGATGCTGCCGCCATTGCCAGAGAATTCTTTAGTTGACAAAGAAATGAAGGTGGAGCTACAAGACTTGGCAAAAGTAGTGAGAAGAACAATAAAAATGGTTGATGGAGATTATGTGAGCAAGTTTCAAGGAGATGGGCAAGAACTTATGGAAGCCCTTGAACCAATATTACAACTGTTGTATTTAATGATCGAGGAAGGTGTTCCTTGTTATACTTTCAGCAGTTGGGTGAGGCTTGGTTTCTATGACACAAACTTTGGATGGGGCAAACCAAATTGGGTTTGTACTATTGGAGTGCCTATAAGAAATGTGATTTTTTTGATGCCATCTTGTTCTGATGACGGAGGAATAGAGGCTTGGGTCACCTTGAATGAGTCTCATATGCCCCACTTTGAAACCAATCCTCTACTTCTTCAATTTGCTTCTTTTGATCCTTAA 759 0.4097 MGEGSDEVVASSSPLHMEASLLFPSKGIEIDFNDMIGEKNITTKRFMFSENSLCRLQEDISRDCVFKPTRVEAVTALIWKSALEAARTTEATHNGSSLMLHAVNIRGRMLPPLPENSLVDKEMKVELQDLAKVVRRTIKMVDGDYVSKFQGDGQELMEALEPILQLLYLMIEEGVPCYTFSSWVRLGFYDTNFGWGKPNWVCTIGVPIRNVIFLMPSCSDDGGIEAWVTLNESHMPHFETNPLLLQFASFDP 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5474g00028 252 Pfam Transferase family 38 242 - -
Pral5474g00028 252 Gene3D - 38 245 IPR023213 -
Pral5474g00028 252 PANTHER F21J9.9 15 249 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5474g00028 Pral-Chr5474 196946 198026 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5474g00028 24 239 Monolignol Biosynthesis Gene Families AT5G48930 24.153 1.00e-11 62.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5474g00028 - K13065 gmx:100792323 217.624