Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5474g00026 ATGGCAGAAGCTCAGGTTGAGATTATATCCAAAGTCACAATAAAGCCGGTATCCCCAACTCCAAATCACCTCAAAAATTTCCAAATTTCTCTCCTTGATGAGATAGCTGCTCCTCCTTCTTTTTATGTTCCCGTTGTTCTCTTCTATTCTGCTTCTAATCAGGATTTTCCCGCAATGTCTCAAAAGTTGAAGTCTTCGCTATCTCAAATTCTCACTAGCTACTATCCATTCTGTGGAAGAATCAAACGAAACAAAAGCAATTACATTGTTGATTGTAATGATGAGGGTGTCCTTTACCTTGAAGCCAGAGTACCCTCAAAGCTATCAGATTTTCTCAACAATAATACCAGCCAACAACTCAATGAGATTATAGAGTTTCTTCCAATAGATCCCTATAAGCCTAAACTAGACGATGATGATGAAGATCGTCTAATAATGGCTGTTCAAGTTACTGAGTTTGGCTGTGGAGGTATGGCAATTGGTGTGTGCATCTCACATAAGGTTTGTGACGGGACAACAGTGGCTACATTCCTCCAAGCTTGGTCTCAAAAGGCAATGGGAGAAGGAAGTGAAGTGGCATCTTCTTCTCTGTCTCTTAATATGGAAGCATCATTGCTTTTTCCACCGAAAGGCATAGAGATTGACTTCAATAACATGATAGGTGAGAAGAACATTACGACGAAAAGATTCTTGTTTAGTGAAAATAGCTTATGCAGATTGAAAGAAGAAATTTCAAGAGGTTGGGGCTTTAAGCCCACTAGAGTTGAAGCTGTAACAACTTTGATATGGAAATCAGCCTTGGAAGCTGCAAAAACCATAGAAACAAGTCACAAAAGTGGTTCATTCATGTTACATATTGTTAATATACGTGGTCGGATGCTACCGCCATTGCTGGAGAATTCTCTAGGTAATCTCTTTGTATCTGCAATTTCTCCATTGTTTGAGGTTGACAAAGAAACAACGGTGGAGCTACAAGATTTGGTAGAAGTAGTGAGAAAAACCATAAGGATGGTTGATGGGAATTTTGTGAGTAAACTTCAAGGAGATGGTCAAGAACTTGTTGAAATCCTTGAATCAATGAAACAAAAGTTGCATGTAGCGGCCAAGCAAAGTGTTCCTTGTTACTGCTTCAGTAGCTGGGTGAGATTTGGTTTCTATGAAACAAACTTTGGATGGGGCAAGCCAACTTGGGTTTGTACTGTTAGAGCGCCTATAAGAAACGCAATCCTTTTTATGCCAACGAGTTCTGAGGATGGAGGAATTGAGGCTTGGGTCACCCTGAATGAGCGTCATATGCTCCAATTTCAAAACAATCCTCTCTTGCTCCAGTTTGCTTCTTTTGTCCCTTAA 1350 0.4007 MAEAQVEIISKVTIKPVSPTPNHLKNFQISLLDEIAAPPSFYVPVVLFYSASNQDFPAMSQKLKSSLSQILTSYYPFCGRIKRNKSNYIVDCNDEGVLYLEARVPSKLSDFLNNNTSQQLNEIIEFLPIDPYKPKLDDDDEDRLIMAVQVTEFGCGGMAIGVCISHKVCDGTTVATFLQAWSQKAMGEGSEVASSSLSLNMEASLLFPPKGIEIDFNNMIGEKNITTKRFLFSENSLCRLKEEISRGWGFKPTRVEAVTTLIWKSALEAAKTIETSHKSGSFMLHIVNIRGRMLPPLLENSLGNLFVSAISPLFEVDKETTVELQDLVEVVRKTIRMVDGNFVSKLQGDGQELVEILESMKQKLHVAAKQSVPCYCFSSWVRFGFYETNFGWGKPTWVCTVRAPIRNAILFMPTSSEDGGIEAWVTLNERHMLQFQNNPLLLQFASFVP 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5474g00026 449 Pfam Transferase family 5 439 - -
Pral5474g00026 449 Gene3D - 222 442 IPR023213 -
Pral5474g00026 449 PANTHER F21J9.9 7 446 - -
Pral5474g00026 449 Gene3D - 3 213 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5474g00026 Pral-Chr5474 117218 118676 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5474g00026 5 436 Monolignol Biosynthesis Gene Families AT5G48930 23.490 6.03e-34 130
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5474g00026 - K13065 gmx:100792323 412.149