Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5472g00009 ATGATGATGAGAGAAGCCATAACAATGGATCTTCTCTCTTTCCCAACACTAGCAGCAATTTCAGTCATACTTTTGTCCCTATTTCTATGGATCAGATCTCAGAAGAACTCACCAAATCACACAAGCAAAGGAAAGCTAGCACCAGAACCATCAGGAGCCTTACCCCTTTTAGGGCATCTTCATCTTCTCGGAGCTCAGGCCCCTCTCGCCCACACCTTAGCTTCTTTCGCCGACAAGTACGGTCCCATCTTCACCATCCGCCTCGGAGCCTTCCCTGCCCTCGTTGTTAGCAGCCAAGACGCCATGAAAGAATGCTTCACCACCAACGACAAAACCCTAGCCTCTCGCCCAAGATCCAGCCACGGCCTCTACCTCGGTTTCAACTACGCCGGCTTCGGGTTTGCACCGGACGGCCCGTACTGGCGCAAATTGAGGAAGCTCGTCATGCTCGAGCTACTGTCAGCTCGGAGAGTCGAATCGCTGAAGCATGTGTACGAATCTGAGATCGATGTTTTCATCGGCGATCTGTACTCGTACGGCGACGGAGATAATAATAACAAACGCAAGGTTGTGATTAGCGAGTGGTTGGAGCGATTGACGCTGAACATAATCACGAGGATGATTGCAGGGAAGAGTTATTTTGGGAATTCGCAGGATGTGGATGATGAAGAGGCTCGCAGGGTTGTGAAGCTGATAAAGGATTTTATGCATATTTCTGGGGAATTTGTTCCTTCGGATTTGATTCCGTTTCTGAGATGGTTTCCAGGTGAAGGAAAAGTTCTCAGATCTATGAAGAAGATGGCGAGTGATTTGGATTCTCTGGCATCAAGTTGGGTTGAAGAGCATCGTGTGAAGAAGACAGAGTCGAATGGTGAGAAGCAGGATTTCATTGACTTCATGCTTTCTGTGGTCGAAGAAGACGACTCTACCTTGGGCCATACACGTGACACTATCATCAAGGCAAATATCTTGAGTCTGATCTTGGCTGGGGCAGACACAACCTCCATCAACCTGACATGGATGCTAGCCTTATTATTAAACAACAAGCACGTCCTAAAGCGTGCCCAAGAGGAGATTGATCATCACGTAGGCAAGCAAAGATGGGTCCAAACTTCAGATACCAAGAACCTAACTTACCTTGAAGCCATCTTCAAAGAAACCCTAAGATTATACCCACCAGGTCCTCTCTTAGTTCCCCATGAAGCAACACAAGATTGCTATATCTCTGGCTATTACGTCCCAAAAGGCACCAGAGTGTTGGCCAACGTGTGGAAACTCCATAGAGACCCAACCATTTGGTCACAGCCTGAAATGTTCATGCCTGAGAGGTTCATTACAGAGAATAATAATAATGATAATGGAGAAATTGATCATGAAGAAGGTCACTACCATTTTCAATACCTTCCTTTTGGGTCTGGCAGAAGGGCTTGTCCTGGTTCGAATCTTGCGGCGCAAGTAAGTGTCTTGACTCTTGCTCGTCTACTTCAAGGGTTTGAGTTGGAGGTAGAAGATGGTGAAAAAGTGGATATGAAAGAAGGAACTAGCTTTACTTTGCCTAAAGCTACTCCCTTACAAGTTGTTCTAACCCCACGACTTTCGCCTCATCTTTATCACTTATTGTATACTTCTTAA 1632 0.4632 MMMREAITMDLLSFPTLAAISVILLSLFLWIRSQKNSPNHTSKGKLAPEPSGALPLLGHLHLLGAQAPLAHTLASFADKYGPIFTIRLGAFPALVVSSQDAMKECFTTNDKTLASRPRSSHGLYLGFNYAGFGFAPDGPYWRKLRKLVMLELLSARRVESLKHVYESEIDVFIGDLYSYGDGDNNNKRKVVISEWLERLTLNIITRMIAGKSYFGNSQDVDDEEARRVVKLIKDFMHISGEFVPSDLIPFLRWFPGEGKVLRSMKKMASDLDSLASSWVEEHRVKKTESNGEKQDFIDFMLSVVEEDDSTLGHTRDTIIKANILSLILAGADTTSINLTWMLALLLNNKHVLKRAQEEIDHHVGKQRWVQTSDTKNLTYLEAIFKETLRLYPPGPLLVPHEATQDCYISGYYVPKGTRVLANVWKLHRDPTIWSQPEMFMPERFITENNNNDNGEIDHEEGHYHFQYLPFGSGRRACPGSNLAAQVSVLTLARLLQGFELEVEDGEKVDMKEGTSFTLPKATPLQVVLTPRLSPHLYHLLYTS 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5472g00009 543 PANTHER CYTOCHROME P450 82C3-RELATED 22 537 - -
Pral5472g00009 543 FunFam Cytochrome P450 82C4 37 529 - -
Pral5472g00009 543 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 470 479 IPR017972 GO:0005506|GO:0016705
Pral5472g00009 543 PRINTS E-class P450 group I signature 467 477 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral5472g00009 543 PRINTS E-class P450 group I signature 318 335 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral5472g00009 543 PRINTS E-class P450 group I signature 381 399 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral5472g00009 543 PRINTS E-class P450 group I signature 477 500 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral5472g00009 543 PRINTS E-class P450 group I signature 199 217 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral5472g00009 543 PRINTS E-class P450 group I signature 77 96 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral5472g00009 543 PRINTS E-class P450 group I signature 422 446 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral5472g00009 543 PRINTS E-class P450 group I signature 338 364 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral5472g00009 543 PRINTS E-class P450 group I signature 101 122 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral5472g00009 543 Gene3D Cytochrome P450 40 535 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral5472g00009 543 PRINTS P450 superfamily signature 468 477 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral5472g00009 543 PRINTS P450 superfamily signature 329 346 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral5472g00009 543 PRINTS P450 superfamily signature 382 393 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral5472g00009 543 Pfam Cytochrome P450 48 520 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral5472g00009 543 SUPERFAMILY Cytochrome P450 48 531 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral5472g00009 543 CDD CYP82 81 531 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5472g00009 Pral-Chr5472 78130 81147 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5472g00009 47 537 Cytochrome P450 AT4G31940 48.297 3.45e-160 465
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5472g00009 - - gmx:100790675 643.269