Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5472g00007 ATGACGATGAGAGAAGCCATAATAAAGGATCTTCTCTCTTTCCCAACACTAGCAGCAATTTCAGTCATACTTTTGTCGCTATTTCTATGGATCAGATCTCAGAAGAACTCACCAAATCACACAAGCAAAGGAAAGCTAGCACCAGAACCAGCAGGAGCCTTACCCCTTTTAGGGCATCTTCATCTTCTCGGAGCTCAGGCCCCTCTCGCCCACACCTTAGCTTCTTTCGCCGACAAGTACGGTCCCATCTTCACCATCCGCCTCGGAGCCTTCCCTGCCCTCGTTGTTAGCAGCCAAGACGCCATTAAAGAATGCTTCACAACCAATGACAAAATCCTAGCTTGTCGCCCCAAATCCAGCCAAGGCATCTACCTCAATTACAACTACGCCTCGTTCGGGTCGGCCCCGGACGGCCCGTATTGGCGCAAATTGAGGAAGCTCGTCATGCTCGAGCTACTGTCAGCTCGGAGAGTCGAATCGTTGAAGTATGTGTACGAATCTGAGATCGATGTTTTCATCGGCGATCTGTACTCGTACGGCGACGGAGATAATAATAACAAACGCAAGGTTGTGATTAGCGAGTGGTTGGAGCGATTGACGCTGAACATAATCACAAGGATGATTGCAGGGAAGAGGTATTTTGGGAATTCGCAGGATGTGGATGATGAAGAGGCTCGCAGGGTTGTGAAGCTGATAAAGGATTTTATGCATATTTCTGGGGAATTTGTTCCTTCGGATTTGATTCCGTTTCTGAGATGGTTTCCAGGTGAAGGAAAAGTTCTCAGATCTATGAAGAAGATGGCGAGTGATTTGGATTCTCTGGCATCAAGTTGGGTTGAAGAGCATCGTGTGAAGAAGAAAGAGTCGAATAGTGAGAAACAGGATTTCATTGACTTCATGCTTTCTGTGATCGAAGAAGACGACTCCACCTTGGGCCATACACGTGACGCTATCATCAAGGCAAATATCTTGAGTCTGATCTTAGCTGGGGCAGACACAACCTCCATCAACCTGACATGGATGCTAGCCTTATTATTAAACAACAAGCACGTCTTAAAGCGTGCCCAGGAGGAGATAGACCATCACGTAGGCAAGCAAAGATGGGTCCAAACTTCAGATACCAAGAACCTAACTTACCTTGAAGCCATCTTCAAAGAAACCCTAAGATTGTACCCAGCAGGTCCTCTCTTAATTCCCCATGAAGCAACACAAGATTGTTATATCTCCGGTTATTACGTCCCAAAAGGCACCAGAGTGTTGGCCAACGTGTGGAAACTCCATAGAGACCCAACCATTTGGTCACAGTCTGAGAAGTTCATGCCTGAGAGGTTCATTACAGAGAATAATAACAATGGAGAAATTGATCATGGAGAAGGTTATGCCCATTTTCAATACCTTCCTTTTGGATCTGGTAGAAGGGCTTGTCCTGGTTCGAATCTTGCGGCGCAAGTAAGTGTCTTGACTCTTGCTCGTCTACTTCAAGGGTTTGAGTTGGAGGTATATGAAAAAGTGGATATGAAAGAAGGAACTAGCATTACTTTGCCTAAAGCTACTCCTTTACAAGTTATTCTAACCCCACGACTTTCGCCTCGTCTTTATCACTTATTGTATACTTCTTAA 1620 0.4556 MTMREAIIKDLLSFPTLAAISVILLSLFLWIRSQKNSPNHTSKGKLAPEPAGALPLLGHLHLLGAQAPLAHTLASFADKYGPIFTIRLGAFPALVVSSQDAIKECFTTNDKILACRPKSSQGIYLNYNYASFGSAPDGPYWRKLRKLVMLELLSARRVESLKYVYESEIDVFIGDLYSYGDGDNNNKRKVVISEWLERLTLNIITRMIAGKRYFGNSQDVDDEEARRVVKLIKDFMHISGEFVPSDLIPFLRWFPGEGKVLRSMKKMASDLDSLASSWVEEHRVKKKESNSEKQDFIDFMLSVIEEDDSTLGHTRDAIIKANILSLILAGADTTSINLTWMLALLLNNKHVLKRAQEEIDHHVGKQRWVQTSDTKNLTYLEAIFKETLRLYPAGPLLIPHEATQDCYISGYYVPKGTRVLANVWKLHRDPTIWSQSEKFMPERFITENNNNGEIDHGEGYAHFQYLPFGSGRRACPGSNLAAQVSVLTLARLLQGFELEVYEKVDMKEGTSITLPKATPLQVILTPRLSPRLYHLLYTS 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5472g00007 539 PRINTS E-class P450 group I signature 101 122 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral5472g00007 539 PRINTS E-class P450 group I signature 422 446 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral5472g00007 539 PRINTS E-class P450 group I signature 465 475 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral5472g00007 539 PRINTS E-class P450 group I signature 318 335 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral5472g00007 539 PRINTS E-class P450 group I signature 381 399 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral5472g00007 539 PRINTS E-class P450 group I signature 338 364 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral5472g00007 539 PRINTS E-class P450 group I signature 475 498 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral5472g00007 539 PRINTS E-class P450 group I signature 199 217 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral5472g00007 539 PRINTS E-class P450 group I signature 77 96 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral5472g00007 539 PANTHER CYTOCHROME P450 82C3-RELATED 22 533 - -
Pral5472g00007 539 Gene3D Cytochrome P450 40 531 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral5472g00007 539 SUPERFAMILY Cytochrome P450 48 527 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral5472g00007 539 FunFam Cytochrome P450 82C4 37 525 - -
Pral5472g00007 539 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 468 477 IPR017972 GO:0005506|GO:0016705
Pral5472g00007 539 PRINTS P450 superfamily signature 329 346 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral5472g00007 539 PRINTS P450 superfamily signature 382 393 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral5472g00007 539 PRINTS P450 superfamily signature 466 475 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral5472g00007 539 Pfam Cytochrome P450 48 508 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5472g00007 Pral-Chr5472 62566 70468 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5472g00007 47 533 Cytochrome P450 AT4G31940 47.686 3.04e-158 459
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5472g00007 - - gmx:100790675 614.379