Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5472g00006 ATGGTCATCAATTCGTTATCTGGGGGGAAGTTGATGGTCAATGCTGAACAAAATCAATTGACGAGCTGGAATAACACAACTCATATTGTAAAGAGTATGGCTGAATATGATCCACGTCTGGTGGCTCCAACCTGCTTGTACCTGGCATCAAAAGCAGAGGAAAGCACAGTGCAGGCTAGACTGCTTGTATTTTACATTAAAAAATCATATTCTGATGATAAGTACAGATTTGAGATCAAGGACATACTTGAAATGGAAATGAAGATTTTAGAGGCGCTTAACTATTACCTGGTTGTTTTCCACCCGTATCGTTCATTGTCTCAGTTGCTCCAGGATGCGGGGTTGAATGATATCAACATGACTCAATTAACATGGGGACTAGTAAATGACACCTACAAGATGGACCTAATTCTTGTGCATCCTCCACATCTGATCGCTTTAGCATGCATATTCATTGCTAGTGTCCTCAGGGAGAAAGACACCACTGCTTGGTTTGAAGAGCTTCGTGTCGATATGAATGTAGTGAAAAATATATCGATGGAGATTCTTGATTTCTATGAAAGCAATCGAATGTTCACAGAGGAGCGGATCAATGCTGCTCTTAGCAAGCTAGGCTTCAGGTCTTAA 627 0.4099 MVINSLSGGKLMVNAEQNQLTSWNNTTHIVKSMAEYDPRLVAPTCLYLASKAEESTVQARLLVFYIKKSYSDDKYRFEIKDILEMEMKILEALNYYLVVFHPYRSLSQLLQDAGLNDINMTQLTWGLVNDTYKMDLILVHPPHLIALACIFIASVLREKDTTAWFEELRVDMNVVKNISMEILDFYESNRMFTEERINAALSKLGFRS 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5472g00006 208 SMART cyclin_7 9 91 IPR013763 -
Pral5472g00006 208 SMART cyclin_7 104 184 IPR013763 -
Pral5472g00006 208 PIRSF Cyclin_C_H_G 22 207 - -
Pral5472g00006 208 Gene3D - 29 98 - -
Pral5472g00006 208 SUPERFAMILY Cyclin-like 101 193 IPR036915 -
Pral5472g00006 208 Pfam Cyclin, N-terminal domain 31 97 IPR006671 -
Pral5472g00006 208 SUPERFAMILY Cyclin-like 30 99 IPR036915 -
Pral5472g00006 208 Gene3D - 99 195 - -
Pral5472g00006 208 PANTHER CYCLIN 29 191 IPR043198 GO:0006357|GO:0016538
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5472g00006 Pral-Chr5472 37344 42576 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5472g00006 32 154 Core Cell Cycle Gene Families AT5G27620 29.323 3.61e-07 47.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5472g00006 K15161 - gmx:100816019 336.265