Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5472g00005 ATGGCCACCAATTTCTGGACATCATCTCATTACAAGCAGCTTGTAGACCAAGAAGATGTGGATATGGTAAACCCACTTGACAAAGAAAAGGGTATCACACTTGAGGATTTTAAGCTCATAAAGATGCACATGGCTAATTATATCTCAAAATTGGCTCAAAGTGTCAAAGTTAGGCAGAGGGTTGTTGCTACTGCAGTTACATATATGAGGCGTGTTTACACCAGAAAGAGTATGGCTGAATATGATCCACGTCTGGTGGCTCCAACCTGCTTGTACCTGGCATCAAAAGCAGAGGAAAGCACAGTGCAGGCTAGACTGCTTGTATTTTACATTAAAAAATCATATTCTGATGATAAGTACAGATTTGAGATCAAGGACATACTTGAAATGGAAATGAAGATTTTAGAGGCGCTTAACTATTACCTGGTTGTTTTCCACCCGTATCGTTCATTGTCTCAGTTGCTCCAGGATGCGGGGTTGAATGATATCAACATGACTCAATTAACATGGGGACTAGTAAATGACACCTACAAGATGGACCTAATTCTTGTGCATCCTCCACATCTGATCGCTTTAGCATGCATATTCATTGCTAGTGTCCTCAGGGAGAAAGACACCACTGCTTGGTTTGAAGAGCTTCGTGTCGATATGAATGTAGTGAAAAATATATCGATGGAGATTCTTGATTTCTATGAAAGCAATCGAATGTTCACAGAGGAGCGGATCAATGCTGCTCTTAGCAAGCTAGGCTTCAGGTCTTAA 762 0.4094 MATNFWTSSHYKQLVDQEDVDMVNPLDKEKGITLEDFKLIKMHMANYISKLAQSVKVRQRVVATAVTYMRRVYTRKSMAEYDPRLVAPTCLYLASKAEESTVQARLLVFYIKKSYSDDKYRFEIKDILEMEMKILEALNYYLVVFHPYRSLSQLLQDAGLNDINMTQLTWGLVNDTYKMDLILVHPPHLIALACIFIASVLREKDTTAWFEELRVDMNVVKNISMEILDFYESNRMFTEERINAALSKLGFRS 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5472g00005 253 SMART cyclin_7 46 136 IPR013763 -
Pral5472g00005 253 SMART cyclin_7 149 229 IPR013763 -
Pral5472g00005 253 PIRSF Cyclin_C_H_G 1 251 - -
Pral5472g00005 253 Gene3D - 19 143 - -
Pral5472g00005 253 CDD CYCLIN_AtCycC_rpt1 35 141 - -
Pral5472g00005 253 FunFam cyclin-C1-2-like isoform X1 19 143 - -
Pral5472g00005 253 Pfam Cyclin, N-terminal domain 42 142 IPR006671 -
Pral5472g00005 253 SUPERFAMILY Cyclin-like 146 238 IPR036915 -
Pral5472g00005 253 PANTHER CYCLIN 26 236 IPR043198 GO:0006357|GO:0016538
Pral5472g00005 253 SUPERFAMILY Cyclin-like 4 144 IPR036915 -
Pral5472g00005 253 Gene3D - 7 240 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5472g00005 Pral-Chr5472 37344 47279 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5472g00005 28 199 Core Cell Cycle Gene Families AT5G27620 25.824 2.11e-11 60.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5472g00005 K15161 - gmx:100784345 468.774