Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5472g00004 ATGAGGCGTGTTTACACCAGAAAGAGTATGGCTGAATATGATCCACGTCTGGTGGCTCCAACCTGCTTGTACCTGGCATCAAAAGCAGAGGAAAGCACAGTGCAGGCTAGACTGCTTGTATTTTACATTAAAAAATCATATTCTGATGATAAGTACAGATTTGAGATCAAGGACATACTTGAAATGGAAATGAAGATTTTAGAGGCGCTTAACTATTACCTGGTTGTTTTCCACCCGTATCGTTCATTGTCTCAGTTGCTCCAGGATGCGGGGTTGAATGATATCAACATGACTCAATTAACATGGGGACTAGTAAATGACACCTACAAGATGGACCTAATTCTTGTGCATCCTCCACATCTGATCGCTTTAGCATGCATATTCATTGCTAGTGTCCTCAGGGAGAAAGACACCACTGCTTGGTTTGAAGAGCTTCGTGTCGATATGAATGTAGTGAAAAATATATCGATGGAGATTCTTGATTTCTATGAAAGCAATCGAATGTTCACAGAGGAGCGGATCAATGCTGCTCTTAGCAAGCTAGGCTTCAGGTCTTAA 558 0.4158 MRRVYTRKSMAEYDPRLVAPTCLYLASKAEESTVQARLLVFYIKKSYSDDKYRFEIKDILEMEMKILEALNYYLVVFHPYRSLSQLLQDAGLNDINMTQLTWGLVNDTYKMDLILVHPPHLIALACIFIASVLREKDTTAWFEELRVDMNVVKNISMEILDFYESNRMFTEERINAALSKLGFRS 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5472g00004 185 Gene3D - 1 75 - -
Pral5472g00004 185 Pfam Cyclin, N-terminal domain 1 74 IPR006671 -
Pral5472g00004 185 SUPERFAMILY Cyclin-like 1 76 IPR036915 -
Pral5472g00004 185 Gene3D - 76 169 - -
Pral5472g00004 185 SMART cyclin_7 81 161 IPR013763 -
Pral5472g00004 185 SMART cyclin_7 1 68 IPR013763 -
Pral5472g00004 185 SUPERFAMILY Cyclin-like 78 170 IPR036915 -
Pral5472g00004 185 PANTHER CYCLIN 1 168 IPR043198 GO:0006357|GO:0016538
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5472g00004 Pral-Chr5472 37344 51161 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5472g00004 2 131 Core Cell Cycle Gene Families AT5G27620 29.286 1.64e-08 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5472g00004 K15161 - gmx:100816019 350.132