Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5471g00017 ATGATCATCAACGTCAAGGCCTCCACCATGGTGCGGCCGGCACAGGAGACGCCTCGCCGGGCGTTATGGAACTCCAACGTCGACCTGGTGGTGCCTAACTTCCATACGCCCAGCGTCTACTTTTACCGGCCCACCGGTGCTGCTAACTTCTTTGACGCTGAGGTTATGAAGCAAGCTCTTGCCAAGGCTCTCGTTCCGTTCTACCCGATGGCCGGCCGCCTCCGCCGTGATGAGGATGGTCGTGTTGAGATTGATTGTAACGGCGAGGGTGTGCTCCTCGTCGAGGCTGAGACCACCGCCGTGATTGACGATTTCGGTGACTTCGCTCCCACGCTTGAGCTCCGGCAGCTTATTCCCGCCGTCGATTATTCTGGCGGCATCGAAACATATCCATTGCTGGTGTTGCAGGTAACGTACTTTAAATGCGGGGGTGTGTCCCTTGGAGTGGGGATGCAGCACCACGCAGCAGATGGGTTCTCTGGGCTCCACTTTATCAATACATGGTCAGACATGGCTCGCGGCTTAGACCTTACCCTCCCACCCTTCATTGATCGCACTTTACTCCGAGCCCGTGACCCGCCTCAGCCTGTATTTGAGCACATCGAATACAAGCCCCCTCCTACCATGAAGTCCCCACCTCAACCCTCAAAACCCGGTTCAGACAACAATGCAGCAGCGGTCTCCATCTTCAAGATGACTCGTGACCAAGTCGCTGCCCTCAAAGCTAAGTCCAAAGAAGATGGTAACACTGTCAACTATAGCTCCTATGAGATGCTTGCTGGTCATGTCTGGAGAAGCACGTGCAAGGCACGTGGACTCCCTGATGATCAAGAGACCAAATTGTATATTGCAACTGATGGACGGTCTAGATTGCAGCCACCCCTTCCACCAGGTTACTTTGGGAATGTGATCTTTACAGCCACGCCTATGGCTATAGCTGGTGATCTCATGTCAAAACCAACTTGGTTTGCTGCTAGCAGGATTCATAATGCGCTCTCAAGAATGGATAATGATTATTTGAGATCAGCTTTGGACTATTTAGAGCTTCAACCTGATCTCAAAGCTCTTGTTCGTGGAGCTCATACTTTTAGATGTCCAAATCTTGGAATCACGAGTTGGGTTAGGCTTCCAATACATGATGCTGATTTTGGATGGGGAAGACCTATATTTATGGGACCCGGTGGGATAGCTTATGAGGGGTTATCTTTTATACTTCCAAGCTCAAACAACGATGGAGGCTTATCAGTGGCAATAGCTCTACAGCCTCAACATATGAAGGTGTTCAAGGAAGTCTTGTATGAGATTTGA 1308 0.5076 MIINVKASTMVRPAQETPRRALWNSNVDLVVPNFHTPSVYFYRPTGAANFFDAEVMKQALAKALVPFYPMAGRLRRDEDGRVEIDCNGEGVLLVEAETTAVIDDFGDFAPTLELRQLIPAVDYSGGIETYPLLVLQVTYFKCGGVSLGVGMQHHAADGFSGLHFINTWSDMARGLDLTLPPFIDRTLLRARDPPQPVFEHIEYKPPPTMKSPPQPSKPGSDNNAAAVSIFKMTRDQVAALKAKSKEDGNTVNYSSYEMLAGHVWRSTCKARGLPDDQETKLYIATDGRSRLQPPLPPGYFGNVIFTATPMAIAGDLMSKPTWFAASRIHNALSRMDNDYLRSALDYLELQPDLKALVRGAHTFRCPNLGITSWVRLPIHDADFGWGRPIFMGPGGIAYEGLSFILPSSNNDGGLSVAIALQPQHMKVFKEVLYEI 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5471g00017 435 Gene3D - 1 205 IPR023213 -
Pral5471g00017 435 FunFam Spermidine hydroxycinnamoyl transferase 1 203 - -
Pral5471g00017 435 Gene3D - 219 435 IPR023213 -
Pral5471g00017 435 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 8 433 - -
Pral5471g00017 435 FunFam Tryptamine hydroxycinnamoyl transferase 212 433 - -
Pral5471g00017 435 MobiDBLite consensus disorder prediction 197 223 - -
Pral5471g00017 435 Pfam Transferase family 3 432 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5471g00017 Pral-Chr5471 169474 175074 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5471g00017 1 435 Monolignol Biosynthesis Gene Families AT5G48930 80.000 0.0 740
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5471g00017 K13065 - gmx:100820075 763.066