Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5471g00003 ATGAAGGATACGGAGAAAAAGAAGTACCCCATTGGCCCTGAGAATTATGAACTACTCGAGGAGATTGGCCAGGGGGTAAGTGCCCACGTACATCGTGCTCGTTGCATTACTTTTAATGAGATCGTTGCCATAAAAATCCTGGATTTTGAGCGAGAAAACTGCGATCTGAATAATGTTTTTCGTGAAGCACAGACCATGACCTTGGTTGACCACCCTAATGTCCTCAAATCACACTGCTCCTTTGTTAGCGATCATAATCTATGGGTTATCATGCCATATATGGCTGGTGGTTCGTGTCTTCACATATTGAAAGCCGCCTACCCAGATGGCTTTGAGGAGGTTGTAATAGCAACAATATTGCGAGAGGCTTTGAAGGGTTTAGAGTACCTTCATCATCATGGCCATATACATAGAGATGTTAAAGCCGGGAACATTCTAATTGATGCGCGCGGTGCAATCAAGCTGGGGGATTTCGGTGTATCTGCTTGTCTTTTTGATTCAGGTGACAGGCAACGTACAAGGAATACATTTGTGGGGACACCTTGCTGGATGGCACCTGAAGTCATGGAGCAACTGCATGGTTACGACTTCAAAGCAGATATGTGGTCTTTTGGTATAACAGCACTGGAGCTTGCCCATGGTCACGCTCCTTTCTCAAAGTATCCTCCCATGAAGGTACTTCTTATGACATTGCAAAATGCACCGCCTGGCCTTGATTATGAACGAGATAAGAAGTTCTCTCAGTCATTTAGGACGATGATTGCTAAATGCTTGGAAAAAGATCCTTCAAAACGACCCACTGCAAGCAGTTTGCTAAAGAATTCCTTCTTTAAGCGAGCTCGCTCTAGTGATTATATTTCGCGAACGCTTTTGGAGGGGCTGCCTGCATTAGGTGATCGCATCAAAGCCCTAAAGAGGAAAGAAGAAGATATGCTTGCAAAAGAACAAATTCCTGATGGGCAGAAGGAGGAAATATCACAGAATGAATACAAGCGAGGAATTAGTAGCTGGAACTTCAATCTTGAAGATATGAAAGCTCAGGCTTCATTGATACAGGATTTTGATGATGCAATGTCTGAAATCAATCCAGGAGGAAGTTCGAATTCCACATCACCAAATGATGTGCAAGAGAAGCAATCACCACGTGCAAACCAATCTCAACTTACTGACATGGAAGATAACGACGAGATGCGAAATCAATCAGCTCCTGTGCCTGCAGTAGATTTCACAACAACTGATGCCAAGGTTAGAAGTGAAAAATCTAATGATGCCTCTATCACCAGTTTAAGCCATGAACACAACTTATCACAGAGTGCTTCACCGCGTCTTGAAGATCATGTAGTGGACCATAATTTTAGTGAAAAATGTGATGTGGAGAATGGG 1383 0.4331 MKDTEKKKYPIGPENYELLEEIGQGVSAHVHRARCITFNEIVAIKILDFERENCDLNNVFREAQTMTLVDHPNVLKSHCSFVSDHNLWVIMPYMAGGSCLHILKAAYPDGFEEVVIATILREALKGLEYLHHHGHIHRDVKAGNILIDARGAIKLGDFGVSACLFDSGDRQRTRNTFVGTPCWMAPEVMEQLHGYDFKADMWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDKKFSQSFRTMIAKCLEKDPSKRPTASSLLKNSFFKRARSSDYISRTLLEGLPALGDRIKALKRKEEDMLAKEQIPDGQKEEISQNEYKRGISSWNFNLEDMKAQASLIQDFDDAMSEINPGGSSNSTSPNDVQEKQSPRANQSQLTDMEDNDEMRNQSAPVPAVDFTTTDAKVRSEKSNDASITSLSHEHNLSQSASPRLEDHVVDHNFSEKCDVENG 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5471g00003 461 SUPERFAMILY Protein kinase-like (PK-like) 14 278 IPR011009 -
Pral5471g00003 461 ProSitePatterns Protein kinases ATP-binding region signature. 22 45 IPR017441 GO:0005524
Pral5471g00003 461 Pfam Protein kinase domain 16 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5471g00003 461 PANTHER SERINE/THREONINE-PROTEIN KINASE FRAY2 5 452 IPR047173 GO:0043539
Pral5471g00003 461 FunFam Serine/threonine-protein kinase BLUS1 5 93 - -
Pral5471g00003 461 FunFam serine/threonine-protein kinase BLUS1 isoform X1 97 330 - -
Pral5471g00003 461 Gene3D Phosphorylase Kinase; domain 1 4 92 - -
Pral5471g00003 461 Gene3D Transferase(Phosphotransferase) domain 1 97 331 - -
Pral5471g00003 461 SMART serkin_6 16 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5471g00003 461 MobiDBLite consensus disorder prediction 421 441 - -
Pral5471g00003 461 MobiDBLite consensus disorder prediction 361 388 - -
Pral5471g00003 461 ProSiteProfiles Protein kinase domain profile. 16 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5471g00003 461 MobiDBLite consensus disorder prediction 357 447 - -
Pral5471g00003 461 CDD STKc_OSR1_SPAK 14 277 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5471g00003 Pral-Chr5471 19107 23320 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5471g00003 5 461 MAP Kinase Kinase Kinase Kinase AT1G79640 71.116 0.0 664
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE20-Fray Pral5471g00003 Pkinase 4.5e-60 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5471g00003 K08835 - qsa:O6P43_017908 735.332