Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5469g00003 ATGGAGCCGTCCATCTCTCGTAGCTCTAATGCCTCCACCAATGGCCTCCTCTCCGTCAACATCCCCAGCCACAATGATGTCGAACCCCTCCCTCCTCGGATCAATGCCGACGACGATGACGACGATGTTGTCGATCCCGATGATCCTTTTGATATCACTCACACCAAGAATGCGCCGGCTGAGACACTCCAGCGATGGAGACAAGCGACTCTAGTTCTCAATGCTTCCCGGCGTTTTAGATATACTCTGGACTTGAAGAAGGGAGAGGACGAAGAGCACAAGAAAGGGATGATAAGAGCCCATGCTCAAGTCGTACGAGCAGCGCTGCTTTTCAGATTAGCCGGTGAACGTGATCTAGCGGTAGGCACAGGAGTGTCAGCCCCAACCTCAGGTGATAACTTCGGAGTTGGGCTCGAACAACTTGTTTCAATGTCCAAGGATCAGAACATTGCTGCTTTGCAAGAAAATGGAGGGGTTAAAGGCTTATCAGATTTACTAAAATCAGATCTTGAGAAAGGAATTAATGGAAGTGACGATGATATATTAAAGAGGAGAGTGACATTTGGAACGAATACATACCCTAAGAAAAAAGGGCGGAGTTTCTGGATGTTTCTCTGGGATGCTTGGCAAGACCTGACCCTCATCATATTGATTATAGCAGCTGTGGTGTCATTGGCACTTGGAATAAAAACAGAGGGCTTGCAAGAAGGATGGTATGATGGAGGAAGCATTGCCTTTGCTGTTTTTCTTGTCATAATAGTAACAGCTACCAGTGATTATCGCCAATCTCTGCAGTTCCAGAATTTGAATTCAGAAAAACAAAACATACAATTGGAGGTCATTAGAGGCGGTAGAGCAACAAAGATATCAATATTTGATGTTGTTGTTGGTGACGTTGTACCTCTCAAAATAGGAGACCAGGTTCCTGCTGATGGGGTTATAATCACTGCTCACTCACTTGCCATTGATGAATCCAGTATGACTGGTGAAAGCAAGATTATTCACAAAGACCACAAATCACCTTTTTTGATGTCTGGCTGTAAAGTAGCAGACGGCGTTGGTGTTATGCTGGTAACTGGGGTCGGCATCAATACGGAGTGGGGGTTGTTGATGGCAAGCATCTCTGAAGATACTGGAGAAGAGACTCCATTGCAGGTACGTTTAAATGGAGTTGCAACTTTTATCGGCATTATAGGTCTAACAGTAGCTGGTGTTGTGCTAGTGGTCCTATTGGGCAGATACTTTTCTGGCAACACAAAAGATCTAAATGGAAATGTCGAATTTGTTGCTGGCCAGACGAGCATCAGTAGTGCACTAGATGACGTAGTAAAAATTTTTACTATTGCAGTCACAATTGTGGTTGTCGCAGTTCCTGAAGGTCTTCCTCTGGCTGTTACCTTAACCCTGGCATACTCAATGCGGAAAATGATGGCAGACAAGGCCTTGGTGCGAAGGCTTTCAGCCTGTGAAACTATGGGCTGTGCAACAACAATTTGCAGTGATAAAACAGGAACGTTAACCTTGAACCAGATGGCCGTGGTTGAGGCATGCATTGGGAGGAAGAAACTGAATTCACCTGATGACTCATCAAAGCTGAATTCAGAAGTTTTATCTCTGATAAAAGAGGGCATTGCACAGAATACAACTGGAACTGTTTTTGTGCCTAAGGATGTTGGAGAGACTGAGATATCAGGGTCTCCTACAGAAAAGGCAATCCTTTCTTGGGCAGTCAAGTTGGGAATGGATTTTGATCTTATCAGGTCACATTCAACAGTTCTCCATGTATTTCCCTTCAATTCAGAGAAAAAGCGAGGTGGTGTCTTGCTGAAGCAGAATGTGGATTCCACAGTACATATACATTGGAAAGGCGCTGCAGAGATAGTACTGGGAAAATGCTCTCAATATCTTGATTCAAACGGTTCCTTGCTTTCTATTGAAGAAGAGAAGGACTTTTTCAAGGCAGCTATTGAAGACATGGCTGCTCGCAGTTTGCGGTGTGTTGCCATTGCATACCGTTCATATGAATTGGACAGAGTTCCCTCTAATGAGGAGGATTTGGCCCAGTGGTCCTTACCTGAGGATGAACTTGTTTTGCTTGCTATAGTTGGTATAAAGGACCCATGTCGCCCTGGTGTCAAAGATGCAGTGACAATATGCACTGCCGCTGGTGTTAAGGTGCGCATGGTTACGGGAGACAATCTTCAAACCGCAAAGGCAATAGCTTTGGAGTGTGGGATACTGGCTTCGCATATAGATGCTGTTGAACCAGTTATCATTGAAGGAAAGACATTCCGGGCCTTATCTGAAAATGAAAGGGAACAAGTTGCTAAACAAATAACAGTGATGGGGAGGTCTTCTCCAAATGACAAGCTTTTACTTGTTCAAGCACTGCGTAAAGGGGGGGAAGTTGTTGCTGTTACTGGAGATGGTACCAATGATGCTCCCGCTCTTCATGAGGCAGATATTGGTCTTTCTATGGGCATTTCTGGAACTGAAGTCGCAAAAGAAAGTTCAGATATTATAATCCTGGACGATAACTTTGCGTCAGTTGTAAAGGTCGTCCGCTGGGGCCGTTCTGTATCTGCAAATATTCAGAAATTTATACAGTTCCAGCTCACAGTTAATGTAGCAGCTCTTGCCATAAATGTTGTGGCGGCAGTTTCTTCGGGTGATGTTCCTTTAAATGCAGTACAGCTTTTGTGGCTTAACCTTATCATGGACACACTTGGGGCCCTGGCACTAGCTACGGAGCCGCCTACTGACCACCTTATGCACAGACCGCCAGTTGGTCGAAGGGAACCTCTCATAACGAATAACATGTGGAGGAACTTGCTTTTACAGGCTGTATATCAAATTGCGGTTCTCCTTGCTCTTAATTTTGGTGGAGAAAGTATTCTCAGGGGTAACTCTGCGGTCGAAACAATGCAACTGAAGAATACTTTGATTTTCAATGCATTTGTCCTCTGCCAAATTTTCAATGAGTTCAATGCTCGTAAACCAGATCAAATGAACGTGTTCACTGGAGTGACCAAGAACCGTCTCTTTGTGGGTATTGTGGGATTGACCTTAATACTTCAGGTAATCATTATAGAGTTCCTTGGAAAGTTCACTAGCACAGTGAGGCTTGATTGGAAGTTGTGGCTCGTTTCTTTTATCATTGGCCTCGTCAGTTGGCCTCTTGCAGTGCTTGGAAAGTTCATCCCAGTTCCAAAAACACCTTTATCTCGCACCTTTAAGAGGATGCTTATGCGATTTAAGAGATCAAGAACTCCTGCTACTCAATAG 3285 0.4451 MEPSISRSSNASTNGLLSVNIPSHNDVEPLPPRINADDDDDDVVDPDDPFDITHTKNAPAETLQRWRQATLVLNASRRFRYTLDLKKGEDEEHKKGMIRAHAQVVRAALLFRLAGERDLAVGTGVSAPTSGDNFGVGLEQLVSMSKDQNIAALQENGGVKGLSDLLKSDLEKGINGSDDDILKRRVTFGTNTYPKKKGRSFWMFLWDAWQDLTLIILIIAAVVSLALGIKTEGLQEGWYDGGSIAFAVFLVIIVTATSDYRQSLQFQNLNSEKQNIQLEVIRGGRATKISIFDVVVGDVVPLKIGDQVPADGVIITAHSLAIDESSMTGESKIIHKDHKSPFLMSGCKVADGVGVMLVTGVGINTEWGLLMASISEDTGEETPLQVRLNGVATFIGIIGLTVAGVVLVVLLGRYFSGNTKDLNGNVEFVAGQTSISSALDDVVKIFTIAVTIVVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGCATTICSDKTGTLTLNQMAVVEACIGRKKLNSPDDSSKLNSEVLSLIKEGIAQNTTGTVFVPKDVGETEISGSPTEKAILSWAVKLGMDFDLIRSHSTVLHVFPFNSEKKRGGVLLKQNVDSTVHIHWKGAAEIVLGKCSQYLDSNGSLLSIEEEKDFFKAAIEDMAARSLRCVAIAYRSYELDRVPSNEEDLAQWSLPEDELVLLAIVGIKDPCRPGVKDAVTICTAAGVKVRMVTGDNLQTAKAIALECGILASHIDAVEPVIIEGKTFRALSENEREQVAKQITVMGRSSPNDKLLLVQALRKGGEVVAVTGDGTNDAPALHEADIGLSMGISGTEVAKESSDIIILDDNFASVVKVVRWGRSVSANIQKFIQFQLTVNVAALAINVVAAVSSGDVPLNAVQLLWLNLIMDTLGALALATEPPTDHLMHRPPVGRREPLITNNMWRNLLLQAVYQIAVLLALNFGGESILRGNSAVETMQLKNTLIFNAFVLCQIFNEFNARKPDQMNVFTGVTKNRLFVGIVGLTLILQVIIIEFLGKFTSTVRLDWKLWLVSFIIGLVSWPLAVLGKFIPVPKTPLSRTFKRMLMRFKRSRTPATQ 1094
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5469g00003 1094 Pfam haloacid dehalogenase-like hydrolase 496 821 - -
Pral5469g00003 1094 FunFam Calcium-transporting ATPase 256 375 - -
Pral5469g00003 1094 ProSitePatterns E1-E2 ATPases phosphorylation site. 501 507 IPR018303 -
Pral5469g00003 1094 PANTHER CATION TRANSPORTING ATPASE 123 1069 - -
Pral5469g00003 1094 FunFam Calcium-transporting ATPase 207 264 - -
Pral5469g00003 1094 Pfam E1-E2 ATPase 276 477 - -
Pral5469g00003 1094 SFLD p-type atpase 481 859 IPR044492 -
Pral5469g00003 1094 Gene3D - 496 852 IPR023214 -
Pral5469g00003 1094 SMART Cation_ATPase_N_a_2 158 229 IPR004014 -
Pral5469g00003 1094 Pfam Cation transporting ATPase, C-terminus 892 1066 IPR006068 -
Pral5469g00003 1094 CDD P-type_ATPase_Ca_PMCA-like 181 940 - -
Pral5469g00003 1094 FunFam Calcium-transporting ATPase 824 1071 - -
Pral5469g00003 1094 Gene3D - 60 112 - -
Pral5469g00003 1094 NCBIfam calcium-translocating P-type ATPase, PMCA-type 146 1069 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
Pral5469g00003 1094 Gene3D - 509 707 IPR023299 GO:0000166
Pral5469g00003 1094 SFLD Haloacid Dehalogenase 481 859 - -
Pral5469g00003 1094 PRINTS Sodium/potassium-transporting ATPase signature 242 262 - -
Pral5469g00003 1094 PRINTS Sodium/potassium-transporting ATPase signature 492 513 - -
Pral5469g00003 1094 PRINTS Sodium/potassium-transporting ATPase signature 619 637 - -
Pral5469g00003 1094 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 506 704 IPR023299 GO:0000166
Pral5469g00003 1094 Pfam Cation transporter/ATPase, N-terminus 156 224 IPR004014 -
Pral5469g00003 1094 PRINTS P-type cation-transporting ATPase superfamily signature 499 513 - -
Pral5469g00003 1094 PRINTS P-type cation-transporting ATPase superfamily signature 722 732 - -
Pral5469g00003 1094 PRINTS P-type cation-transporting ATPase superfamily signature 323 337 - -
Pral5469g00003 1094 PRINTS P-type cation-transporting ATPase superfamily signature 807 826 - -
Pral5469g00003 1094 PRINTS P-type cation-transporting ATPase superfamily signature 700 711 - -
Pral5469g00003 1094 PRINTS P-type cation-transporting ATPase superfamily signature 831 843 - -
Pral5469g00003 1094 NCBIfam HAD-IC family P-type ATPase 434 530 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pral5469g00003 1094 NCBIfam HAD-IC family P-type ATPase 773 887 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pral5469g00003 1094 SUPERFAMILY HAD-like 497 912 IPR036412 -
Pral5469g00003 1094 Gene3D - 207 1060 - -
Pral5469g00003 1094 SUPERFAMILY Calcium ATPase, transduction domain A 277 372 IPR008250 -
Pral5469g00003 1094 Gene3D - 178 375 - -
Pral5469g00003 1094 Pfam Ca2+-ATPase N terminal autoinhibitory domain 47 88 IPR024750 GO:0005516
Pral5469g00003 1094 FunFam Calcium-transporting ATPase 9 plasma membrane-type 353 523 - -
Pral5469g00003 1094 MobiDBLite consensus disorder prediction 1 21 - -
Pral5469g00003 1094 FunFam Calcium-transporting ATPase 700 852 - -
Pral5469g00003 1094 MobiDBLite consensus disorder prediction 1 55 - -
Pral5469g00003 1094 FunFam Calcium-transporting ATPase 509 707 - -
Pral5469g00003 1094 SUPERFAMILY Calcium ATPase, transmembrane domain M 156 1069 IPR023298 -
Pral5469g00003 1094 FunFam Calcium-transporting ATPase 58 114 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5469g00003 Pral-Chr5469 12873 27605 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5469g00003 9 1089 Primary Pumps ATPases AT3G21180 74.654 0.0 1618
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5469g00003 K01537 - gmx:100777845 1683.31