Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5469g00001 ATGGATGGTATTCATGGGAGTGATTCTCGTATGCACATGAGTGATGCACAACATTCGATGCATGTGCCCTATGTGCCAGAAAACGAACAACATGGATTGGACCATATGAGTGATGGAAATAGGATGGAGGACAATAACAACTGTGGTGATGCTAATGTCAGCAGACATGAGAGTGTAGAAGGAGAAGTTTCCAACCCTGGAAATGTCACTGATGATCATGGTGCGATAATTGAACAAGCTAGTGGTGACCAGCTCACATTGTCTTTTCAAGGCCAGGTTTATGTATTTGACTGTGTGTCGCCGGAAAAG 309 0.4401 MDGIHGSDSRMHMSDAQHSMHVPYVPENEQHGLDHMSDGNRMEDNNNCGDANVSRHESVEGEVSNPGNVTDDHGAIIEQASGDQLTLSFQGQVYVFDCVSPEK 103
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5469g00001 103 MobiDBLite consensus disorder prediction 42 65 - -
Pral5469g00001 103 PANTHER GATA TRANSCRIPTION FACTOR 28 17 103 IPR045280 GO:0006355
Pral5469g00001 103 MobiDBLite consensus disorder prediction 1 15 - -
Pral5469g00001 103 Pfam tify domain 81 103 IPR010399 -
Pral5469g00001 103 MobiDBLite consensus disorder prediction 1 73 - -
Pral5469g00001 103 ProSiteProfiles Tify domain profile. 78 103 IPR010399 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5469g00001 Pral-Chr5469 737 1045 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5469g00001 1 103 Tify Gene Family AT1G51600 50.467 1.15e-23 90.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Pral5469g00001 tify 1.3e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5469g00001 - - pvu:PHAVU_008G254600g 137.117