LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pral5468g00003	ATGGATGATGATATGGAGAGCGGTAGTTTAGGGCCTTACCAGGACAAACTAAGAACATTTCCCAACATGCGTAGTAAAGCCTACACCCCACTGATATTTCGTATTCTTCTTGGTATAAATACTCGTGTCCTGTTCATACTTTTGCTTCTGGGTCTTGGAGCTGTCTTCTACGTTGGAGCAAGCACATCTCCAATCCTTGTGTTTGTCTTCTCTGTTTGTATTCTCAGCTTCCTTGTGTCAATATATCTTACAAAGTGGGTGCTTGCAAAGGATGAGGGCCCTCCTGAAATGGTTCAGATATCAGACGCTATACGAGATGGAGCTGAAGGATTTTTCAGGACCCAGTATGGTAGTATATCCAAGATGGCAATGTTGCTTGCTCTGGTGATCCTTTGCATATATTTGTTCCGTAGTACCACTCCTCAACAGGAATCTTCTGGCCTGGGAAGGTCATCTTCTGCGTACATCACAGTAGCTGCATTCCTTTTAGGTGCTCTTTGTTCTGGTATTGCAGGATATGTAGGAATGTGGGTGTCAGTCCGTGCCAATGTCAGAGTTTCTAGTGCTGCAAGACGGTCTGCAAGAGAGGCATTGCAGGTAGCTACTCGTGCTGGTGGTTTATCAGCTCTTGTTGTTGTTGGTATGGCTGTACTTGGTATAGCAATCCTTTATGCCACATTTTATGTTTGGTTGGGAGTGGACACACCGGGTGCAATGAAGGTTACTGATTTGCCTCTTCTTCTTGTTGGATATGGTTTTGGTGCCTCCTTTGTTGCACTGTTCGCGCAGCTGGGTGGTGGAATATTCACGAAGGCAGCTGATGTTGGAGCAGACCTTGTTGGAAAAGTGGAGCAGGGGATTCCTGAAGATGACCCTCGGAATCCTGCTGTAATTGCTGACCTGGTTGGAGACAATGTGGGAGATTGTGCTGCTAGAGGTGCTGATCTTTTTGAAAGTATTGCAGCGGAAATAATCAGTGCTATGATACTTGGGGGAACAATGGCACAGCGGTGTAAAATAGATCCGTCTGGCTTCATCTTGTTTCCTCTTGTTGTTCACTCATTTGATCTGGTGGTTTCATCAGTTGGAATATTTTCAATTAGGGGCACACGTGAGAGTGGTGTTAAGGCTCCCATTGAGGATCCAATGACAATTCTTCAGAAAGGATACTCTATTACGATAGTTTTAGCTGTTTTGACTTTCGGTCTGTCTACTCGGTGGTTACTGTACACAGAACAAGCTCCATCAGCGTGGTTCAATTTTGCCTTGTGTGGGTTGATTGGTATAATCACTGCTTACATTTTTGTCTGGATAACCAAGTATTACACAGACTACAAGCATGAGCCTGTGCGTGCAATAGCCCTTTCTAGCTCCACGGGTCATGGGACAAATATAATTGCTGGGGTCAGCTTGGGCCTGGAATCAACTGCCCTTCCTGTCCTTGTCATTAGTGTGTCAATTGTCTCTGCATTCTGGCTGGGTCACAGCTCTGGGCTACTTGATGAAGCAGGAAACCCAACTGGTGGGCTTTTTGGCACAGCTGTAGCAACTATGGGAATGCTGAGCACCGCTGCTTATGTTCTTACCATGGATATGTTTGGTCCAATTGCTGATAATGCTGGAGGTATTGTAGAGATGAGTCAGCAGCCTGAAAGTGTCCGAGAGATCACTGATGTTCTTGACGCAGTTGGTAACACAACCAAAGCTACTACTAAAGGATTTGCTATTGGTTCTGCTGCTCTTGCTTCTTTCCTTTTGTTTAGTGCTTATATGGATGAGGTTTCTGCATTTGCACATGAACCTTTTAAACAGGTTGATATTGCAATTCCAGAGGTTTTTGTTGGTGGGCTATTGGGTTCGATGCTTATTTTTCTGTTCAGCGCTTGGGCTTGTTCTGCTGTTGGCCGAACTGCTCAAGAAGTTGTTAATGAAGTAAGAAGGCAGTTCATTGAGAGGCCTGGCATTATGGAGTATAAGGAGAAACCAGATTATGGTCGATGTGTTGCTATCGTAGCATCTGCTTCACTGAGGGAGATGATAAAACCTGGTGCTCTTGCCATCATTTCGCCTATTGTTGTTGGATTTCTGTTCCGAATTTTGGGTTACTATACAGGGCACCCGCTACTTGGGGCTAAAGTTGTGGCTGCCTTGCTGATGTTTGCAACAGTTTCTGGTATTCTGATGGCACTTTTCCTGAACACTGCCGGTGGTGCCTGGGATAATGCAAAGAAGTACATTGAGACTGGAGCACTTGGAGGCAAGGGTAGCGATGCTCACAAAGCTGCAGTAACTGGAGACACGGTGGGAGACCCTTTCAAAGACACAGCTGGGCCTTCACTTCATGTTGTTATTAAGATGCTTGCAACAATTACACTAGTTATGGCTCCAGTCTTCCTGTGA	2400	0.4533	MDDDMESGSLGPYQDKLRTFPNMRSKAYTPLIFRILLGINTRVLFILLLLGLGAVFYVGASTSPILVFVFSVCILSFLVSIYLTKWVLAKDEGPPEMVQISDAIRDGAEGFFRTQYGSISKMAMLLALVILCIYLFRSTTPQQESSGLGRSSSAYITVAAFLLGALCSGIAGYVGMWVSVRANVRVSSAARRSAREALQVATRAGGLSALVVVGMAVLGIAILYATFYVWLGVDTPGAMKVTDLPLLLVGYGFGASFVALFAQLGGGIFTKAADVGADLVGKVEQGIPEDDPRNPAVIADLVGDNVGDCAARGADLFESIAAEIISAMILGGTMAQRCKIDPSGFILFPLVVHSFDLVVSSVGIFSIRGTRESGVKAPIEDPMTILQKGYSITIVLAVLTFGLSTRWLLYTEQAPSAWFNFALCGLIGIITAYIFVWITKYYTDYKHEPVRAIALSSSTGHGTNIIAGVSLGLESTALPVLVISVSIVSAFWLGHSSGLLDEAGNPTGGLFGTAVATMGMLSTAAYVLTMDMFGPIADNAGGIVEMSQQPESVREITDVLDAVGNTTKATTKGFAIGSAALASFLLFSAYMDEVSAFAHEPFKQVDIAIPEVFVGGLLGSMLIFLFSAWACSAVGRTAQEVVNEVRRQFIERPGIMEYKEKPDYGRCVAIVASASLREMIKPGALAIISPIVVGFLFRILGYYTGHPLLGAKVVAALLMFATVSGILMALFLNTAGGAWDNAKKYIETGALGGKGSDAHKAAVTGDTVGDPFKDTAGPSLHVVIKMLATITLVMAPVFL	799

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pral5468g00003	799	PANTHER	K(+)-INSENSITIVE PYROPHOSPHATE-ENERGIZED PROTON PUMP	90	798	IPR004131	GO:0004427\|GO:0009678\|GO:0016020\|GO:1902600
	Pral5468g00003	799	PIRSF	H+-PPtase	59	799	IPR004131	GO:0004427\|GO:0009678\|GO:0016020\|GO:1902600
	Pral5468g00003	799	Hamap	Putative K(+)-stimulated pyrophosphate-energized sodium pump [hppA].	63	799	IPR004131	GO:0004427\|GO:0009678\|GO:0016020\|GO:1902600
	Pral5468g00003	799	NCBIfam	V-type H(+)-translocating pyrophosphatase	66	798	IPR004131	GO:0004427\|GO:0009678\|GO:0016020\|GO:1902600
	Pral5468g00003	799	Pfam	Inorganic H+ pyrophosphatase	74	794	IPR004131	GO:0004427\|GO:0009678\|GO:0016020\|GO:1902600

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pral5468g00003	Pral-Chr5468	34233	43220	Dispersed/Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pral5468g00003	1	799	Primary Pumps ATPases	AT1G16780	87.000	0.0	1438

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pral5468g00003	K23025		-	vvi:100247980	1418.68