Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5466g00006 ATGGACATGCTCTTCACTTTGATTTATTTCGTAGCGTTTTCTCTTTTAGCTCTCATCCTTCTCTTCACTTTCCTCATAGTCACCATCTTCGCCGGAAAATCCATCGGAGACCCAAAATTCCCTCCGGTGAAAGGAACCGTCTTCAACCAGCTCTTCCACTTCAATTCAATCTACGACTACCACACCGAAATCGCCAGATCGCACCCAACTTTCCGGCTTCTTGCTCCGGGGAGAAGCAAGGTGTTCACGGCGGACTCGCGAAACGTGGAGCACGTTCTGAAAACGCGGTGGGAAACGTACCCGAAAGGGGAGCGGAATCACCAGACTGTGGCGGATCTTCTGGGGGAAGGTATTTTCGCCGTGGATTCTGAGAAATGGAGGCAGCAGAGGAAGCTTTCGAGCTTTGAGTTCTCAACTAGGGTTCTTAGAGATTTCAGTTGCTCTGTTTTCAGAAGGAATGCTGCCAAATTGGTTAGGGTCATTTCTGAATCTTCCAATGCTGGTCTTGGATTTGATATGCAGGAGGCGCTGATGAGATGCACTTTGGACTCGATATTCAAAGCGGGATTTGGAGTGGAGTTGGAGTGCTTGGAGGGAACAAGCGAAGAGGGAAGCCAATTCTTGAAGGCCTTTGATGATTCTAATGCCTTCGTTTATCGTCGTTACGTGGATCCTTTCTGGAAGATCAAGAGGTTTCTCAATATTGGATCTGAAGCTGCTCTCAAGAACAATGTCAAAATAATTGATGATTTTGTGAATGGTCTTATCAGAACCAAAAGACAACTTTTGACGTCTCAGCAAGATACGAGTGAAAAGGAGGACATACTCTCAAGGTTTTTGTTGAAGAGCGAGGAGCAGCCATCAGAGAATAATATGACAGATAAATATCTGAGGGACATAATTCTGAACTTCATGATTGCTGGCAAAGATACGAGTGCTAATACCATGTCTTGGTTCTTCTACATGCTGTGCAAGTACCCTCTCGTGCAAGAGAAGATTGCTCAAGAAGTGAAACAAGTTACTAATTATTCTTCAAGTCATCACCAAACAATGAGTAGTATAGCCAATGTGGATGAGTTTGTGGCCAATATTACAGATTCTTGCCTTGACAGAATGCATTATCTTCATGCAGCTTTGACTGAAACTTTGAGGCTATACCCTGCTGTCCCTATTAATGGGAGAACAGCAGGAGCAGATGACATTCTTCCAGATGGCCACAGAATAAACAAGGGAGATTCAATTTACTACTTGGCCTATGCCATGGGCAGGATGCCTTTTATATGGGGCCCCGATGCTGACCAATTTCGACCCGAAAGATGGCTCGAAAACGGCACGTTTCAGCCTCAATCTCCATTCAAATTTGTAGCTTTCCATGCTGGTCCTCGTATCTGTTTAGGGAGGGACTTCGCTTACAGACAGATGAAAATAGTTTCCATGGCTCTCGTTCGATTCTTCAGATTTAAATTGGAAGATGAAACCAGAAATGTGACTTACAAGACCATGTTTACTCTTCATATTCACAACGGTCTCCCTCTCTGCGCAGTTCCCAGACATTATGCCTGA 1563 0.4466 MDMLFTLIYFVAFSLLALILLFTFLIVTIFAGKSIGDPKFPPVKGTVFNQLFHFNSIYDYHTEIARSHPTFRLLAPGRSKVFTADSRNVEHVLKTRWETYPKGERNHQTVADLLGEGIFAVDSEKWRQQRKLSSFEFSTRVLRDFSCSVFRRNAAKLVRVISESSNAGLGFDMQEALMRCTLDSIFKAGFGVELECLEGTSEEGSQFLKAFDDSNAFVYRRYVDPFWKIKRFLNIGSEAALKNNVKIIDDFVNGLIRTKRQLLTSQQDTSEKEDILSRFLLKSEEQPSENNMTDKYLRDIILNFMIAGKDTSANTMSWFFYMLCKYPLVQEKIAQEVKQVTNYSSSHHQTMSSIANVDEFVANITDSCLDRMHYLHAALTETLRLYPAVPINGRTAGADDILPDGHRINKGDSIYYLAYAMGRMPFIWGPDADQFRPERWLENGTFQPQSPFKFVAFHAGPRICLGRDFAYRQMKIVSMALVRFFRFKLEDETRNVTYKTMFTLHIHNGLPLCAVPRHYA 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5466g00006 520 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 457 466 IPR017972 GO:0005506|GO:0016705
Pral5466g00006 520 Pfam Cytochrome P450 45 506 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral5466g00006 520 Gene3D Cytochrome P450 35 517 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral5466g00006 520 CDD CYP86A 69 510 - -
Pral5466g00006 520 PRINTS E-class P450 group I signature 296 313 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral5466g00006 520 PRINTS E-class P450 group I signature 376 394 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral5466g00006 520 PRINTS E-class P450 group I signature 454 464 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral5466g00006 520 PRINTS E-class P450 group I signature 316 342 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral5466g00006 520 PRINTS E-class P450 group I signature 464 487 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral5466g00006 520 PRINTS P450 superfamily signature 307 324 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral5466g00006 520 PRINTS P450 superfamily signature 464 475 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral5466g00006 520 PRINTS P450 superfamily signature 377 388 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral5466g00006 520 PRINTS P450 superfamily signature 455 464 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral5466g00006 520 PANTHER CYTOCHROME P450 25 510 - -
Pral5466g00006 520 SUPERFAMILY Cytochrome P450 39 517 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5466g00006 Pral-Chr5466 78045 81812 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5466g00006 1 517 Cytochrome P450 AT2G45510 61.509 0.0 681
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5466g00006 - - gmx:100792128 746.503