Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5465g00003 ATGGATCCAGTAGCCGCACAAGGTCGTCCTCTTCCGCCGCCTTTTCTTACCAGAGATCTTCATCTTCATCCCCATCACCAATTCCAGACGACCCACCATAATAACAATCACTCAGCCGCCGACGATGACCAGGCCGGTAATGGCAGCTTGAACCGCGGTCAGAAGCGAGATCACGAGAATACCGCCACTGAGGGAAAGGAATTCGGTTCTAACACAGCTCCTGCCGGAGAGGGTACCGGAGGTGGCGGTGGGGATAATAGTGGTAGAAGGCCTCGTGGCCGACCCGCCGGTTCGAAGAACAAGCCCAAGCCGCCGATCATCATAACGAGGGATAGCGCCAACGCGCTTAGGTCTCACGTCATGGAGATCGCCAACGGCGGAGACATCATGGAGAGTGTCGCCACCTTCGCGCGAAGGAGGCAGCGTGGGGTTTGCATTCTGAGTGGGAGTGGCACCGTCACGAATGTCACCCTCCGGCAGCCAGCTTCGCCCGGTGCAGTTGTGACCTTACATGGGAGATTCGAGATTCTATCACTGTCCGGCTCGTTCCTGCCTCCGCCGGCACCACCTGCGGCATCAGGGCTGGCCATATATCTGTCCGGCGGACAGGGTCAAGTCGTCGGAGGCACCGTGGTGGGGCCGTTGTTGGCGTCAGGGCCAGTGGTCATTATGGCTGCTTCGTTCGGAAATGCGGCGTACGAGAGGCTGCCGTTGGAAGAGGAGGAGACTCAAGTGCCGGTGACTGGAAGCGGAGGGTTAGGCTCGCCAGGAATTGTGGGAACACAGCAACAATCACAGCAGAATCAGCAACAAATCGTCGGAGATCCTAACACTACATCGATGTTTCATGGAGTTCCTCAGAATCTGCTGAATTCTTGCCAATTACCAGCTGAAGGATTCTGGGGTGGAGGCAGTACTGCTCGTCCTCCATTCTAA 936 0.5705 MDPVAAQGRPLPPPFLTRDLHLHPHHQFQTTHHNNNHSAADDDQAGNGSLNRGQKRDHENTATEGKEFGSNTAPAGEGTGGGGGDNSGRRPRGRPAGSKNKPKPPIIITRDSANALRSHVMEIANGGDIMESVATFARRRQRGVCILSGSGTVTNVTLRQPASPGAVVTLHGRFEILSLSGSFLPPPAPPAASGLAIYLSGGQGQVVGGTVVGPLLASGPVVIMAASFGNAAYERLPLEEEETQVPVTGSGGLGSPGIVGTQQQSQQNQQQIVGDPNTTSMFHGVPQNLLNSCQLPAEGFWGGGSTARPPF 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5465g00003 311 CDD DUF296 117 184 IPR005175 -
Pral5465g00003 311 SUPERFAMILY AF0104/ALDC/Ptd012-like 113 247 - -
Pral5465g00003 311 MobiDBLite consensus disorder prediction 27 107 - -
Pral5465g00003 311 Pfam Plants and Prokaryotes Conserved (PCC) domain 117 229 IPR005175 -
Pral5465g00003 311 Gene3D - 116 247 - -
Pral5465g00003 311 MobiDBLite consensus disorder prediction 255 270 - -
Pral5465g00003 311 ProSiteProfiles PPC domain profile profile. 113 251 IPR005175 -
Pral5465g00003 311 FunFam AT-hook motif nuclear-localized protein 116 243 - -
Pral5465g00003 311 PIRSF ESCAROLA 17 311 IPR014476 GO:0003680
Pral5465g00003 311 MobiDBLite consensus disorder prediction 29 51 - -
Pral5465g00003 311 MobiDBLite consensus disorder prediction 242 270 - -
Pral5465g00003 311 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 39 292 IPR014476 GO:0003680
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5465g00003 Pral-Chr5465 45892 47652 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5465g00003 1 311 AT-hook Motif Nuclear Localized (AHL) Family AT2G45430 61.656 1.01e-87 263
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5465g00003 - - gmx:100816243 394.43