Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5455g00021 ATGACTTCTGATGATTCTCTTCACTCTCCTCACCAATCCTTACCAAAACTCACTTTGTACCCCATAACCTTGAAGTTTGAGGAGGTGGTGTATAAAGTGAAACCAGAGCATAAAGGGCTGTGCTGGGGAAGTTCGTGGAGTTGCAGAGAGAAGACGATACTGAATGGAATCACAGGGATGGTATCGCCAGGTGAGATTCTGGCCATGCTGGGTCCTTCTGGGAGCGGCAAAACGACACTTCTCACAGCTCTTGGAGGTCGTTTAAATGGCAGATCATTATCAGGCAAAATCACATACAACAACCAACCCTTCTCAGGCTCCATCAAAAGAACGACAGGTTTTGTGGCTCAGGACGATGTTCTCTACCCACATCTCACTGTCTCTGAAACCCTAATCTTCACCGCACTTCTCAGGCTTCCCAATAGCCTCACCAACACCGAGAAGATGAAACACGTTGAGAGAGTTATCGCAGAACTTGGCCTCGCACGTTGCAGAAACAGTATCATTGGAGGAGCATTGGTGAGAGGCATATCAGGAGGAGAGAAGAAGAGAGTGAGTATAGGCCAAGAAATGCTCATAAATCCCAGCTTGTTGCTGCTAGATGAACCCACGTCGGGGTTGGATTCCACGACGGCTCAGAGAATATTGACCACCGTGAAGGGGCTGGCTAGCGGCGGAAGGACGGTGGTCACCACCATCCACCAACCGTCGAGCCGTCTGTATCATATGTTTGACAAGGTGGTGGTGCTGTCGGAAGGATGGAGTATCTATAATGGACCAGCTGCGGCCGCCATGGAGTATTTTTCTTCTATTGGTTTCTCCACATCCATCACTGTCAATCCTGCTGACTTCTTGCTTGATCTTGCTAACGGGATTGCCCCTGACTCCAAGCAAGCAAGTCAACAGAGTGAGAGCTCGGAACAAGAGAGGGAGCAAACCAGAGAAGTTCTCGTTTCTGCTTATGAAAACAACATTGCTCCAAAGTTGAAACTTGAGATTTCTAGCCACAACTTCACCAAACGTGCTTCATCAAGAAATGACATAGCAAAAGCAGAGCAATGGTGCACAAGCTGGTGGTATCAGTTCATAGTGTTGTTACAAAGAGGGATCAGAGAACGAAGATATGAAGCCTTCAATGGATTGAGAATATTCCAAGTCATAAGTGTTGCTTTCCTTGGTGGACTCTTGTGGTGGCATACCCCAGAATCTCACATCCAAGACAGGGTAGCATTGCTGTTTTTCTTCTCTGTTTTCTGGGGATTTTACCCTCTGTACAATGCAGTTTTCACTTTCCCTCAAGAAAGAAGAATGCTTATCAAAGAGCGATCCTCAGGAATGTATCGTCTCTCTTCCTACTTTCTGGCAAGAACAATAGGAGATCTGCCACTAGAACTTGCACTTCCCACTCTATTTGTGTTCATAATCTACTGGATGGGAGGCCTTAAGCCTGATCCCGTGACCTTCATTCTCTCACTAGTCGTTGTTCTGTACAGTGTTCTTGTGTCACAGAGTCTGGGCTTAGCATTTGGAGCTATTCTAATGGAGATTAAGCAGGCCACGACTCTAGCTTCTGTCACAACCCTAGTGTTCCTCATTGCTGGAGGCTACTACGTTCAACAGATCCCCCCATTCATAGCTTGGCTCAAGTACTTAAGCTATAGTTATTACTGTTACAGGCTGCTTCTGGGTGTTCAGTACGATGAAGATGATTACTATGAGTGCTCCAATGGGGTTTTGTGCAGAGTCGAAGATTTCCCTCCCATTAAATCAATGGGTTTGAATCATTTGTGGGTGGATGTTCTCATGATGGCTCTCATGTTGGTGGGTTATCGACTGGTTGCTTATTTAGCACTACACAGAGTGAGGTAG 1869 0.4639 MTSDDSLHSPHQSLPKLTLYPITLKFEEVVYKVKPEHKGLCWGSSWSCREKTILNGITGMVSPGEILAMLGPSGSGKTTLLTALGGRLNGRSLSGKITYNNQPFSGSIKRTTGFVAQDDVLYPHLTVSETLIFTALLRLPNSLTNTEKMKHVERVIAELGLARCRNSIIGGALVRGISGGEKKRVSIGQEMLINPSLLLLDEPTSGLDSTTAQRILTTVKGLASGGRTVVTTIHQPSSRLYHMFDKVVVLSEGWSIYNGPAAAAMEYFSSIGFSTSITVNPADFLLDLANGIAPDSKQASQQSESSEQEREQTREVLVSAYENNIAPKLKLEISSHNFTKRASSRNDIAKAEQWCTSWWYQFIVLLQRGIRERRYEAFNGLRIFQVISVAFLGGLLWWHTPESHIQDRVALLFFFSVFWGFYPLYNAVFTFPQERRMLIKERSSGMYRLSSYFLARTIGDLPLELALPTLFVFIIYWMGGLKPDPVTFILSLVVVLYSVLVSQSLGLAFGAILMEIKQATTLASVTTLVFLIAGGYYVQQIPPFIAWLKYLSYSYYCYRLLLGVQYDEDDYYECSNGVLCRVEDFPPIKSMGLNHLWVDVLMMALMLVGYRLVAYLALHRVR 622
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5455g00021 622 Gene3D - 43 271 IPR027417 -
Pral5455g00021 622 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 12 615 - -
Pral5455g00021 622 CDD ABCG_EPDR 21 259 - -
Pral5455g00021 622 Pfam ABC-2 type transporter 360 566 IPR013525 GO:0016020|GO:0140359
Pral5455g00021 622 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 46 271 IPR027417 -
Pral5455g00021 622 Pfam ABC-2 type transporter 234 303 IPR043926 GO:0140359
Pral5455g00021 622 Pfam ABC transporter 54 205 IPR003439 GO:0005524
Pral5455g00021 622 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 24 277 IPR003439 GO:0005524
Pral5455g00021 622 ProSitePatterns ABC transporters family signature. 177 191 IPR017871 GO:0005524|GO:0016887
Pral5455g00021 622 SMART AAA_5 63 253 IPR003593 GO:0016887
Pral5455g00021 622 FunFam ABC transporter G family member 22 41 271 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5455g00021 Pral-Chr5455 148353 151431 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5455g00021 53 253 Calmodulin-binding Proteins AT2G36910 28.365 1.02e-10 63.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5455g00021 K05681 - gmx:100794774 998.038