Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5455g00018 ATGGCGGCTCTATGGGGATCGCTGGCCGCAGGGGGAGACATATCCAAGGCTCATATGGCTATGGTGATGGTTCAGCTTTTCAGTGGAGGATACCACGTCATCACCAAAGTAGCCCTCAATGTTGGAGTCAACCAATTAGTGTTTTGCGTTTTCCGTGATCTCCTTGCCCTCGCTATTCTTGCTCCCATCGCTTACATCCGGGAAAAACGGACACGACCACCTATAACTAAACGCCTCCTGATATCATTTTTCTTTCTTGGATTAACAGGGATATTCGGCAACCATCTTTTGTTTCTTATTGGTTTAAGCTATACTAATCCAACTTATGCAGCTGCGATACAGCCAGCCATTCCAGTCTTCACTTTTCTTTTGGCTGTAATGATGGGTACAGAAAGGGTGAATTTACTCAGATATGAAGGTCTGGCAAAAGTTGGAGGAACTCTCATCTGTGTTTGTGGGGCCATATTCATGGTTTTGTTTCGTGGTCCAGCATTGATAGGATACGCAGATTCGGACATTTTAGAACATAGCGAAATAACTGCTAGAGGTCAACCTGAACCATATGGATGGTTAATTGGCGGTTTAATGGATCTTGGTTTAGACCATTTTCATCTTGGGGTTCTGTGCTTGATTGGAAACTGCATGTGCATGGCTACTTTTCTGGCCATTCAGGCTCCGCTATTGAAAAAGTATCCTGCAAATCTATCTGTCACAGCATACTCTTACTTTTTTGGAGCTCTGCTAATGGTGACCACAGCATTTTTCATGACCAACGAGTCAACTGACTGGAGCTTGACGCCATCTGAAACATTTGCTGTTATTTATGCTGGAACCATTGCATCTGCCCTTAACTATGGACTCTTGACATGGTGCAACAAGATTTTGGGTCCGGCTATGGTTGCCCTTTACAACCCGCTTCAACCTGCAGCATCCGCCCTTCTGTCACGAATTTTCCTTGGAAGTCCTATTTTCTTGGGAAGTGTCCTTGGGGGATCTTTGATCATTGCTGGTCTATATGTGGTGACTTGGGCAACTTGTAGAGAAAGACAAGCGGCACTTGGAGTTATTCCTCAGGGCTCCTGGGTCTCCGAGCAAATGAGTCATACCGATGGATTAGTGAGCAAGAGTTCATTTCAGTTAGGTCACATTTTTTCAGGGTCACCGAAGTCTTCTGATTAA 1179 0.4487 MAALWGSLAAGGDISKAHMAMVMVQLFSGGYHVITKVALNVGVNQLVFCVFRDLLALAILAPIAYIREKRTRPPITKRLLISFFFLGLTGIFGNHLLFLIGLSYTNPTYAAAIQPAIPVFTFLLAVMMGTERVNLLRYEGLAKVGGTLICVCGAIFMVLFRGPALIGYADSDILEHSEITARGQPEPYGWLIGGLMDLGLDHFHLGVLCLIGNCMCMATFLAIQAPLLKKYPANLSVTAYSYFFGALLMVTTAFFMTNESTDWSLTPSETFAVIYAGTIASALNYGLLTWCNKILGPAMVALYNPLQPAASALLSRIFLGSPIFLGSVLGGSLIIAGLYVVTWATCRERQAALGVIPQGSWVSEQMSHTDGLVSKSSFQLGHIFSGSPKSSD 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5455g00018 392 SUPERFAMILY Multidrug resistance efflux transporter EmrE 52 160 - -
Pral5455g00018 392 SUPERFAMILY Multidrug resistance efflux transporter EmrE 243 345 - -
Pral5455g00018 392 PANTHER WAT1-RELATED PROTEIN 17 349 IPR030184 GO:0016020|GO:0022857
Pral5455g00018 392 Pfam EamA-like transporter family 18 156 IPR000620 GO:0016020
Pral5455g00018 392 Pfam EamA-like transporter family 205 342 IPR000620 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5455g00018 Pral-Chr5455 118920 123361 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5455g00018 16 276 Nodulin-like Gene Family AT3G45870 72.797 2.94e-128 368
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5455g00018 - - gmx:100809051 621.698