Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5455g00007 ATGAAATATCGCCTCTTTAGACTCACGCGCTTTATGCTTTGGCTAATTCCGCTGTTATGGAGCTTAACTTGCCATGTTTTGAGATTAGAGAGCTCCCAAGTCTCGCTTGTGGATCATACTGAGCGAGGCTTTGATGGCATACACCCACCCTTAAGCCGTCCAGGCCGATCTATTTTGTCCTTTTCACGTAAGCCCAATACGACCCTTGTTGCTACCCTAGATGGGACAATATATTTGGTGGAGATTGGTTCTATGAGGGTAATATGGTCATTCCCTACTGGATCACCAATCTACCACTCATATCAAGCTCCTTTCAACAAGGATAATATTAAAGAGAATGTGTGTGGATTAGCTAGCGGGTTCATGGAATGTGGAGATGATTGGGCACTATATATCCAAAGCAAGCACTTTGGAAAAATGAGACTCTCAACATCTGTGGCAGATTTTGTTGCGGCTACACCTACCTTTTCGGATGATGGAGGTGTTATTCTTGGTTCCAGAAGAAGTACTTTATTTGAAATTGATGCTATAAGTGGAAAGCTCATTCGAAGCTATGCTGCTGATAATCTTTCTGCTCTGTGGAGGAGTGATATGCATAATGCAACAAATATTGTCAATACAAAGAATAAAGAGCTGGCTGGTCCTGCAATGCTAAGCACACCAGAGCTTCTGCTTAAAATAATTAGAACAGATTATTCTCTACAAGGTGTCGGTCCTAGATCTGGAAAATTTTTGTGGACTATGAATGTGGCTGAATTTAAGGCTTCATTATTCTGTGGACATGATGAAAATCTGTTTAGTGGGGCTTCTTTGGATTCAGAGGATAAATATGCCTCCAACAATGACTTGGATTTTGCTATGCCATATGCATGTCATGAGTTAAAAGAGGTACATCGCCTGCAAAAGAATCTTCTTTTTGGTGATCATCATGATGAGAAAATGCTTCCTGTGCCTACTTCAGATCTGATGCTTCTCCCACAATCAAATTTAGATATATCTTTAAATCAACGTGATGATGATACGATGCTTCTTACCTCTCCAAATGCGTTGCCTTCTTTGCCCTCAAATTTTAATCCCCATGACATTGATGATAATGCAGCCACTCTCTCTCAACCTCCCACAGAGATTAGCACACGAGGGGAAGTTGATAGAAACAAGATGACAGAATGGCCAAGAGCATCTTTATTATTGTTTGTGCTCTTACTTCTGGGTCTTTTGGTGCACCGTCTTCCGGTGGTCAAAAAGCTAGTTATGTTGATGGTTCAAAATGGTGGATCCGAAATAAAAGCTTCTCCTTCTAAGAAAAAAAGAGCACGTAAGTCAGGAAAAAATAATGTCATTGATGACAAAAGAAATAAGCATCTGTCATCAGAAGATGAGGACGTAATGGCAAGTAGCAAAGTTGCTAGAGAAGCATTGCCACGTGCTGAAAAAGTTGAAGGAGCCAATGGACGTCAAATTGGTAAACTCTTCGTATCAAATAAAGAAATTGCCAAGGGAAGTAATGGTACTATAGTCCTTGAGGGAATGTATGAAGGTCGGGCAGTTGCTATCAAGCGTTTGGTCCAGGCCCATTATGATATTGCTGTTAAAGAAATTCAAAATCTTATTGCATCTGATCATCATCCTAACATTGTCCGATGGCATGGGGTTGAATTTGATCAAGATTTTATATATCTTGCTCTGGAACGTTGTATGTGCAATTTAGATGATTTGATTCAGATGTATTCAGATTGCTCTTCAAAACCAGGGTCTAGTGAAAACCAATCTTCTGAATGTTTGAAGGTCCAAATAGAGATGGGAAAGGGTAACATGCAAGAGCTTTGGAAAGCAAATGGCTATCCATCCTCATTATTATTGAAGTTGATCAGGGATATAGTTTCTGGACTTGTTCACTTGCATGAATTGGGAATAATACATCGTGATTTGAAACCTCAGAATATTTTGATAACTAAGGAAAGACATTTAGGTGCAAAAGTGTCTGATATGGGTATCAGCAAACGCCTTCTTGGAGATATATCTTCCTTTAGTCATAATGGTACTGGTTGTGGCAGTTCTGGTTGGCAAGCACAAGAACAGCTTCATCAAAGACGTCAAACGCGAGCAGTAGATTTATTTAGTCTAGGTTGTGTTCTCTTCTTTTGCATAACTAAGGGAAAACATCCATTTGGAGAGCGTCTTGAACGTGATTTCAATATTGTGAAAGATAAAAAGAACCTTGCTCCAGTGGAGTTCATTCCTGAGGCTGAAGATCTTATTTCTAGTTTATTAAACCGTAATCCAAAGTCAAGGCCAAAGGCTATTGAAGTGCTGCATCATCCTTTTTTCTGGAGTTCTGAGATGAGACTTTCATTTCTTCGTGATGCTAGTGATAGGGTGGAACTAGAAGACAGGAGTCCTAATTCTAATTTTTTAGTGGCATTAGAAAGTATTGCGCCACAGGCCTTAGACAATGCAAATTGGAATGAAAAGATGGAACCTGCCTTCATTGCTAACATCGGCCGATACAGGCGATATAAGTATGACAGTGTTCGTGACTTGTTGCGGGTTATGAGAAACAAGCTGAATCATTATAGAGAATTGCCTCGAGAAATTCAGCAACTTCTAGGACCTGTTCCAGAAGGGTTCAATGACTACTTCGCTAGTCGATTTCCTAAACTCTTAATTAAAGTGTATAAAATTGTACGTAAATATTGCAAGCAGGAGGAATGCTTCCAAAGGTATTTTAATAATGTTGATTAG 2742 0.3961 MKYRLFRLTRFMLWLIPLLWSLTCHVLRLESSQVSLVDHTERGFDGIHPPLSRPGRSILSFSRKPNTTLVATLDGTIYLVEIGSMRVIWSFPTGSPIYHSYQAPFNKDNIKENVCGLASGFMECGDDWALYIQSKHFGKMRLSTSVADFVAATPTFSDDGGVILGSRRSTLFEIDAISGKLIRSYAADNLSALWRSDMHNATNIVNTKNKELAGPAMLSTPELLLKIIRTDYSLQGVGPRSGKFLWTMNVAEFKASLFCGHDENLFSGASLDSEDKYASNNDLDFAMPYACHELKEVHRLQKNLLFGDHHDEKMLPVPTSDLMLLPQSNLDISLNQRDDDTMLLTSPNALPSLPSNFNPHDIDDNAATLSQPPTEISTRGEVDRNKMTEWPRASLLLFVLLLLGLLVHRLPVVKKLVMLMVQNGGSEIKASPSKKKRARKSGKNNVIDDKRNKHLSSEDEDVMASSKVAREALPRAEKVEGANGRQIGKLFVSNKEIAKGSNGTIVLEGMYEGRAVAIKRLVQAHYDIAVKEIQNLIASDHHPNIVRWHGVEFDQDFIYLALERCMCNLDDLIQMYSDCSSKPGSSENQSSECLKVQIEMGKGNMQELWKANGYPSSLLLKLIRDIVSGLVHLHELGIIHRDLKPQNILITKERHLGAKVSDMGISKRLLGDISSFSHNGTGCGSSGWQAQEQLHQRRQTRAVDLFSLGCVLFFCITKGKHPFGERLERDFNIVKDKKNLAPVEFIPEAEDLISSLLNRNPKSRPKAIEVLHHPFFWSSEMRLSFLRDASDRVELEDRSPNSNFLVALESIAPQALDNANWNEKMEPAFIANIGRYRRYKYDSVRDLLRVMRNKLNHYRELPREIQQLLGPVPEGFNDYFASRFPKLLIKVYKIVRKYCKQEECFQRYFNNVD 913
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5455g00007 913 Pfam Protein kinase domain 493 776 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5455g00007 913 Gene3D KEN domain 779 913 IPR038357 -
Pral5455g00007 913 SUPERFAMILY Quinoprotein alcohol dehydrogenase-like 60 189 IPR011047 -
Pral5455g00007 913 SMART serkin_6 491 776 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5455g00007 913 SMART PGNneu 842 896 - -
Pral5455g00007 913 CDD RNase_Ire1 780 909 - -
Pral5455g00007 913 Gene3D Transferase(Phosphotransferase) domain 1 599 778 - -
Pral5455g00007 913 Gene3D Phosphorylase Kinase; domain 1 477 563 - -
Pral5455g00007 913 ProSiteProfiles KEN domain profile. 779 911 IPR010513 GO:0004540|GO:0006397
Pral5455g00007 913 SUPERFAMILY Protein kinase-like (PK-like) 491 780 IPR011009 -
Pral5455g00007 913 FunFam Serine/threonine-protein kinase/endoribonuclease IRE1 780 913 - -
Pral5455g00007 913 FunFam Serine/threonine-protein kinase/endoribonuclease IRE1a 601 778 - -
Pral5455g00007 913 MobiDBLite consensus disorder prediction 442 463 - -
Pral5455g00007 913 ProSiteProfiles Protein kinase domain profile. 491 776 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5455g00007 913 PANTHER IRE1-RELATED 140 911 IPR045133 GO:0004521|GO:0004674|GO:0030968
Pral5455g00007 913 Gene3D - 50 282 IPR015943 GO:0005515
Pral5455g00007 913 Pfam Ribonuclease 2-5A 782 909 IPR010513 GO:0004540|GO:0006397
Pral5455g00007 913 MobiDBLite consensus disorder prediction 427 463 - -
Pral5455g00007 913 FunFam Putative Serine/threonine-protein kinase/endoribonuclease IRE1 483 563 - -
Pral5455g00007 913 ProSitePatterns Serine/Threonine protein kinases active-site signature. 638 650 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5455g00007 Pral-Chr5455 33227 39037 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5455g00007 495 779 MAP Kinase Kinase Kinase AT5G66850 27.152 3.47e-18 87.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK IRE1 Pral5455g00007 Pkinase 1.3e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5455g00007 K08852 - gmx:100788389 982.63