Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5453g00060 ATGGCGAGGATCAAACCTCAAGCTCTACTACAGCAAAGCAAGAGGAAAAAGGGGCCTTCTCGAATAAGTGCCACTACTATTATATTTTACAGCTTGATTCCTGTCTTGGTTGTGTTTTTCCTGTTCAGTGCGTACAGACATTGGTCCCACAGGTCAAGATTTGCATCAGAGAACCACATTACAACCTCTCAGGCTGAAAATTCTTTTGGAGACTCAAAGAAGTCTGAGCTGCCCGGATATGCTGTTTTAAATACCTCTAAAGGCTCCATAGTAATTGAACTTTACAAGGAAAGTGCTCCTGAAGTTGTTGATGAATTTATTGACTTATGTCAAAAAGGGCAATTCAAGGGAATGCTTTTCCACCATGTAATTAAGCACTATGTGATTCAGGCTGGAGAGAACCAAGGGACTGGGGCGACAGAAGATTGGAACCTAAGAGGAAAACATTATTCGAGCGTGAAGCATGAAGCGTTCATGCTTGGAACTTCCAAGGGCAAACACTTGAACAAAAAATTTGATCTTTTCATTACAACTGCACCAATACCAGATCTAAATGAGAAGCTTATTATATTTGGCCGAGTCATCAAGGGAGAGGATGTTGTTCAGGAAATTGAAGAAGTGGATACAGATGAACACTTCCAACCTAAAATATCTATTGGAATACTTGATGTGACGCTCGAACAGAAGATCTGA 693 0.4069 MARIKPQALLQQSKRKKGPSRISATTIIFYSLIPVLVVFFLFSAYRHWSHRSRFASENHITTSQAENSFGDSKKSELPGYAVLNTSKGSIVIELYKESAPEVVDEFIDLCQKGQFKGMLFHHVIKHYVIQAGENQGTGATEDWNLRGKHYSSVKHEAFMLGTSKGKHLNKKFDLFITTAPIPDLNEKLIIFGRVIKGEDVVQEIEEVDTDEHFQPKISIGILDVTLEQKI 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5453g00060 230 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 120 132 IPR002130 GO:0000413|GO:0003755
Pral5453g00060 230 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 94 109 IPR002130 GO:0000413|GO:0003755
Pral5453g00060 230 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 173 185 IPR002130 GO:0000413|GO:0003755
Pral5453g00060 230 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 186 201 IPR002130 GO:0000413|GO:0003755
Pral5453g00060 230 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE CYP21-4 1 230 - -
Pral5453g00060 230 SUPERFAMILY Cyclophilin-like 79 226 IPR029000 -
Pral5453g00060 230 Gene3D - 65 230 IPR029000 -
Pral5453g00060 230 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 82 224 IPR002130 GO:0000413|GO:0003755
Pral5453g00060 230 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 77 226 IPR002130 GO:0000413|GO:0003755
Pral5453g00060 230 CDD cyclophilin 82 223 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5453g00060 Pral-Chr5453 313025 319280 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5453g00060 79 226 U-box Gene Family AT5G67530 28.387 1.90e-15 73.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5453g00060 - - ccaj:109810600 392.889