Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5453g00051 ATGGCAAGACACACTGTGGCTATAATTGGTCCCCAGACATCCATAACAGCTCATGTCATATCTCATGTTGCAAACGAGCTCCAAGTTCCACTTCTATCATTTTCAGCCACTGACCCTACACTTTCTTCCCTTCAATTCCCATTCTTTGTTAGAACTGCTCCTAGTGATATTTATCAGATGACTGCAATTGCTGAGCTTGTAGACTTCTATGGATGGAGAGAGGTTATTGCAATTTATGCTGACGATGACCATGGGAGGAATGGAATTGGTTCTTTAGGGGATAAGCTTGCAGAGAGACGTTGTAAAATCTCATATAAAGCACCGATAAGCCCTGAAGCAAATAAGGAGGAGATTACTGATGTGCTTGTTCAGGTGGCTCTTGCTGAATCTCGGATTATAATTCTTCACACTAATGCTGCATGGGGGCCCCATGTATTTAATGTGGCAAAATATCTTGGGATGATGGGAACTGGGTATGTCTGGATAGCCACCAACTTTCTCACTACTCTTCTGGACTCTGAGAGTCCCATCCCTCCAGATCAAATAGATGAAATTCAAGGAGTTCTCACACTGCGTATGCACACACCTGATTCAGAGCTCAAGAGAAGGTTCTTTTCTAGGTGGAAAAACCTGACTAGGGGAGCGATTGCTGATGGTCCACTTGGATTGAACACTTTTGGTCTCTATGCATATGATACTGTTTATATGCTTGCTCGTGCACTTGATACATTTTTCAAACAAGGGAACCGTATCACATTCTCCTATGATTCGAAGTTATCTCAACTACGTGGAGACAGCTTGCATCTTGATGCAGTGAACATCTTTGATCAAGGAAATCTGTTGCGTACAAGTATTTATGGGGTTAACATGACTGGGGTAACAGGTCATATTGAGTATGCGGCTGATGGGAATCCTATGAATCCATCATATGAAATCATCAATGTAATAGGAACAGGCGCAAGGAGGATTGGTTATTGGTCTAATCACTCTGGATTATCTGTTGATTCTCCAGAAGTACTTTATTCAAAACCAGCCAATCGTTCCAGTGCGAATCAAAAGCTGCTCCCTGTGATCTGGCCTGGAGAAACAACACAGAAGCCCCGTGGTTGGGTTTTTCCAAACAATGGAAGGCACTTAAGAATTGGAGTACCAAGAAGGGTTAGTTTCCGATCATTTGTCTCACAAATACAAGGCACTGATATGTTCACGGGATTCTGCATTGATGTATTCCTTGCTGCTGTGAACTTACTGCCCTATGCGGCTCCCTATAAGTTCATTCCATTTGGGGATGGTCACAGCAATCCTAATAATACTGAGCTTGTTCGTCTGATCACGGCTGGCGTCTTTGATGCTGCAGTGGGTGACATTACGATTACAACAGAAAGAACAAAGATGGTGGATTTTACTCAGCCATATATCGAGTCCGGTCTAGCAGTCGTAGCACCTGTTAAGAAGGTAGAATCCAATGCATGGGCTTTTCTGAGACCATTTACGCCGATGATGTGGGGTGTCACAGCAATCTTCTTCTTAGTCGTGGGTGCTGTTGTTTGGATCTTGGAGCATAGGCTGAATGATGATTTTCGAGGGCCTCCCAAAAAGCAAGTCGTGACAATTTTGTGGTTTAGCTTTTCAACCATGTTCTTTGCTCACAGGGAAAATACAGTGAGCACACTTGGTCGGTTCGTGCTACTTATATGGCTATTTGTGGTTCTTATAATTAATTCAAGTTACACAGCAAGTCTGACCTCAATCCTCACAGTACAGCAGCTTTCTTCCCCCATTAAGGGCATTGAAAGCTTAGTAAAGAGCAAAGAACCTATTGGCTACTTGCAGGGTTCTTTCACTCGAGATTACTTAGTTGAGGAAGTTGGGATTCATGAATCAAGACTCGTTCCTCTGCAGAAAGGAGTTGAGATTGCTAAAGCATTAAAAGATGGTCCCTGGAAAGGCGGTGTCGCTGCATATGTGGATGAGCGTGCTTTTATTGAGTTCTTCCTTTCAAGCCGGTGTGATTTTACTATTGTAGGTCAAGAGTTCACCAGAAATGGTTGGGGATTTGCCTTTCCTAGAGACTCTCCTTTAGCAGTTGACCTTTCAACAGCCATTCTGGAACTATCAGAGAATGGAGATCTTCAAAGGATCCATGACAAATGGCTTTTGAAGAGCGCATGCCTAGCACCAGGTGCAAAGCTTGAAGTGGACAGACTTGATCTTAAATCCTTCTGGGGTCTCTATTTAGTATGTGGACTCGCTTGTCTGCTCGCCCTCCTCATCTATCTCGTACAAATGATGAGACAGTACGCCAAACACTACTCCGACGAAATCGAGTCCTCCAGCCAGAGCTCGATGTCGGCACGTCTCCGGACTTTCCTGACATTTGTGAACGAGAAAGAGGAAGAAGTTAAGCATCGTTCCAACAGAAGACAACTGGAAAGGATCTCGTCCAGAAGCAGTAGTACTGTGGGTGGATCATTGTCATCTTCAAACATATATTCCAACAAGGAATATGCTCAATCCTCTTCAACCAAAAGCGCTGATTGTGGTTATGACGCCTGA 2556 0.4378 MARHTVAIIGPQTSITAHVISHVANELQVPLLSFSATDPTLSSLQFPFFVRTAPSDIYQMTAIAELVDFYGWREVIAIYADDDHGRNGIGSLGDKLAERRCKISYKAPISPEANKEEITDVLVQVALAESRIIILHTNAAWGPHVFNVAKYLGMMGTGYVWIATNFLTTLLDSESPIPPDQIDEIQGVLTLRMHTPDSELKRRFFSRWKNLTRGAIADGPLGLNTFGLYAYDTVYMLARALDTFFKQGNRITFSYDSKLSQLRGDSLHLDAVNIFDQGNLLRTSIYGVNMTGVTGHIEYAADGNPMNPSYEIINVIGTGARRIGYWSNHSGLSVDSPEVLYSKPANRSSANQKLLPVIWPGETTQKPRGWVFPNNGRHLRIGVPRRVSFRSFVSQIQGTDMFTGFCIDVFLAAVNLLPYAAPYKFIPFGDGHSNPNNTELVRLITAGVFDAAVGDITITTERTKMVDFTQPYIESGLAVVAPVKKVESNAWAFLRPFTPMMWGVTAIFFLVVGAVVWILEHRLNDDFRGPPKKQVVTILWFSFSTMFFAHRENTVSTLGRFVLLIWLFVVLIINSSYTASLTSILTVQQLSSPIKGIESLVKSKEPIGYLQGSFTRDYLVEEVGIHESRLVPLQKGVEIAKALKDGPWKGGVAAYVDERAFIEFFLSSRCDFTIVGQEFTRNGWGFAFPRDSPLAVDLSTAILELSENGDLQRIHDKWLLKSACLAPGAKLEVDRLDLKSFWGLYLVCGLACLLALLIYLVQMMRQYAKHYSDEIESSSQSSMSARLRTFLTFVNEKEEEVKHRSNRRQLERISSRSSSTVGGSLSSSNIYSNKEYAQSSSTKSADCGYDA 851
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5453g00051 851 CDD GluR_Plant 379 719 - -
Pral5453g00051 851 Pfam Bacterial extracellular solute-binding proteins, family 3 402 720 IPR001638 -
Pral5453g00051 851 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 7 794 IPR015683 -
Pral5453g00051 851 FunFam Glutamate receptor 616 723 - -
Pral5453g00051 851 Gene3D - 1 307 - -
Pral5453g00051 851 SMART GluR_14 380 721 IPR001320 GO:0015276|GO:0016020
Pral5453g00051 851 FunFam Glutamate receptor 490 620 - -
Pral5453g00051 851 Pfam Receptor family ligand binding region 3 317 IPR001828 -
Pral5453g00051 851 PRINTS Metabotropic glutamate GPCR signature 40 59 IPR000337 GO:0004930|GO:0007186|GO:0016020
Pral5453g00051 851 PRINTS Metabotropic glutamate GPCR signature 75 92 IPR000337 GO:0004930|GO:0007186|GO:0016020
Pral5453g00051 851 PRINTS Metabotropic glutamate GPCR signature 8 34 IPR000337 GO:0004930|GO:0007186|GO:0016020
Pral5453g00051 851 PRINTS Metabotropic glutamate GPCR signature 59 75 IPR000337 GO:0004930|GO:0007186|GO:0016020
Pral5453g00051 851 MobiDBLite consensus disorder prediction 804 828 - -
Pral5453g00051 851 Pfam Ligand-gated ion channel 721 752 IPR001320 GO:0015276|GO:0016020
Pral5453g00051 851 SUPERFAMILY Periplasmic binding protein-like I 3 371 IPR028082 -
Pral5453g00051 851 Gene3D - 55 332 - -
Pral5453g00051 851 Gene3D - 689 719 - -
Pral5453g00051 851 Gene3D - 649 688 - -
Pral5453g00051 851 FunFam Glutamate receptor 55 207 - -
Pral5453g00051 851 PIRSF IGluLR_plant 1 848 IPR017103 -
Pral5453g00051 851 Gene3D - 490 613 - -
Pral5453g00051 851 Gene3D - 371 489 - -
Pral5453g00051 851 MobiDBLite consensus disorder prediction 812 828 - -
Pral5453g00051 851 FunFam Glutamate receptor 374 490 - -
Pral5453g00051 851 SUPERFAMILY Periplasmic binding protein-like II 354 722 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5453g00051 Pral-Chr5453 271910 275536 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5453g00051 1 819 Ion Channels AT3G51480 62.409 0.0 1090
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5453g00051 K05387 - gmx:100788917 1280