Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5453g00050 ATGATTAACGTTTGGCTTGCGATGTTAATGATCCTCTCTAATGGGCTTTCTTCATCTGGGGCTGGCGTGAACAATTCAGCAATACCTGAATTTGTAAATATTGGAGCGCTTTTCTCTTTCAATACCACCGTGGGTAGAATTGTGAAAATAGCTATTGAAGCGGCAGTTGCAGATATAAATTCCGATCCTTCCATTCTTGAACAAACTGAGCTGAGGGTCTCAATGCAAGAGGACTCCAAATACAGAGGTTTTCTAAGCATTTCTGAGGTCTTGCAGCTCATGGCAAGACACACTGTGGCTATAATTGGTCCCCAGACATCCATAACAGCTCATGTCATATCTCATGTTGCAAACGAGCTCCAAGTTCCACTTCTATCATTTTCAGCCACTGACCCTACACTTTCTTCCCTTCAATTCCCATTCTTTGTTAGAACTGCTCCTAGTGATATTTATCAGATGACTGCAATTGCTGAGCTTGTAGACTTCTATGGATGGAGAGAGGTTATTGCAATTTATGCTGACGATGACCATGGGAGGAATGGAATTGGTTCTTTAGGGGATAAGCTTGCAGAGAGACGTTGTAAAATCTCATATAAAGCACCGATAAGCCCTGAAGCAAATAAGGAGGAGATTACTGATGTGCTTGTTCAGGTGGCTCTTGCTGAATCTCGGATTATAATTCTTCACACTAATGCTGCATGGGGGCCCCATGTATTTAATGTGGCAAAATATCTTGGGATGATGGGAACTGGGTATGTCTGGATAGCCACCAACTTTCTCACTACTCTTCTGGACTCTGAGAGTCCCATCCCTCCAGATCAAATAGATGAAATTCAAGGAGTTCTCACACTGCGTATGCACACACCTGATTCAGAGCTCAAGAGAAGGTTCTTTTCTAGGTGGAAAAACCTGACTAGGGGAGCGATTGCTGATGGTCCACTTGGATTGAACACTTTTGGTCTCTATGCATATGATACTGTTTATATGCTTGCTCGTGCACTTGATACATTTTTCAAACAAGGGAACCGTATCACATTCTCCTATGATTCGAAGTTATCTCAACTACGTGGAGACAGCTTGCATCTTGATGCAGTGAACATCTTTGATCAAGGAAATCTGTTGCGTACAAGTATTTATGGGGTTAACATGACTGGGGTAACAGGTCATATTGAGTATGCGGCTGATGGGAATCCTATGAATCCATCATATGAAATCATCAATGTAATAGGAACAGGCGCAAGGAGGATTGGTTATTGGTCTAATCACTCTGGATTATCTGTTGATTCTCCAGAAGTACTTTATTCAAAACCAGCCAATCGTTCCAGTGCGAATCAAAAGCTGCTCCCTGTGATCTGGCCTGGAGAAACAACACAGAAGCCCCGTGGTTGGGTTTTTCCAAACAATGGAAGGCACTTAAGAATTGGAGTACCAAGAAGGGTTAGTTTCCGATCATTTGTCTCACAAATACAAGGCACTGATATGTTCACGGGATTCTGCATTGATGTATTCCTTGCTGCTGTGAACTTACTGCCCTATGCGGCTCCCTATAAGTTCATTCCATTTGGGGATGGTCACAGCAATCCTAATAATACTGAGCTTGTTCGTCTGATCACGGCTGGCGTCTTTGATGCTGCAGTGGGTGACATTACGATTACAACAGAAAGAACAAAGATGGTGGATTTTACTCAGCCATATATCGAGTCCGGTCTAGCAGTCGTAGCACCTGTTAAGAAGGTAGAATCCAATGCATGGGCTTTTCTGAGACCATTTACGCCGATGATGTGGGGTGTCACAGCAATCTTCTTCTTAGTCGTGGGTGCTGTTGTTTGGATCTTGGAGCATAGGCTGAATGATGATTTTCGAGGGCCTCCCAAAAAGCAAGTCGTGACAATTTTGTGGTTTAGCTTTTCAACCATGTTCTTTGCTCACAGGGAAAATACAGTGAGCACACTTGGTCGGTTCGTGCTACTTATATGGCTATTTGTGGTTCTTATAATTAATTCAAGTTACACAGCAAGTCTGACCTCAATCCTCACAGTACAGCAGCTTTCTTCCCCCATTAAGGGCATTGAAAGCTTAGTAAAGAGCAAAGAACCTATTGGCTACTTGCAGGGTTCTTTCACTCGAGATTACTTAGTTGAGGAAGTTGGGATTCATGAATCAAGACTCGTTCCTCTGCAGAAAGGAGTTGAGATTGCTAAAGCATTAAAAGATGGTCCCTGGAAAGGCGGTGTCGCTGCATATGTGGATGAGCGTGCTTTTATTGAGTTCTTCCTTTCAAGCCGGTGTGATTTTACTATTGTAGGTCAAGAGTTCACCAGAAATGGTTGGGGATTTGCCTTTCCTAGAGACTCTCCTTTAGCAGTTGACCTTTCAACAGCCATTCTGGAACTATCAGAGAATGGAGATCTTCAAAGGATCCATGACAAATGGCTTTTGAAGAGCGCATGCCTAGCACCAGGTGCAAAGCTTGAAGTGGACAGACTTGATCTTAAATCCTTCTGGGGTCTCTATTTAGTATGTGGACTCGCTTGTCTGCTCGCCCTCCTCATCTATCTCGTACAAATGATGAGACAGTACGCCAAACACTACTCCGACGAAATCGAGTCCTCCAGCCAGAGCTCGATGTCGGCACGTCTCCGGACTTTCCTGACATTTGTGAACGAGAAAGAGGAAGAAGTTAAGCATCGTTCCAACAGAAGACAACTGGAAAGGATCTCGTCCAGAAGCAGTAGTACTGTGGGTGGATCATTGTCATCTTCAAACATATATTCCAACAAGGAATATGCTCAATCCTCTTCAACCAAAAGCGCTGATTGTGGTTATGACGCCTGA 2835 0.436 MINVWLAMLMILSNGLSSSGAGVNNSAIPEFVNIGALFSFNTTVGRIVKIAIEAAVADINSDPSILEQTELRVSMQEDSKYRGFLSISEVLQLMARHTVAIIGPQTSITAHVISHVANELQVPLLSFSATDPTLSSLQFPFFVRTAPSDIYQMTAIAELVDFYGWREVIAIYADDDHGRNGIGSLGDKLAERRCKISYKAPISPEANKEEITDVLVQVALAESRIIILHTNAAWGPHVFNVAKYLGMMGTGYVWIATNFLTTLLDSESPIPPDQIDEIQGVLTLRMHTPDSELKRRFFSRWKNLTRGAIADGPLGLNTFGLYAYDTVYMLARALDTFFKQGNRITFSYDSKLSQLRGDSLHLDAVNIFDQGNLLRTSIYGVNMTGVTGHIEYAADGNPMNPSYEIINVIGTGARRIGYWSNHSGLSVDSPEVLYSKPANRSSANQKLLPVIWPGETTQKPRGWVFPNNGRHLRIGVPRRVSFRSFVSQIQGTDMFTGFCIDVFLAAVNLLPYAAPYKFIPFGDGHSNPNNTELVRLITAGVFDAAVGDITITTERTKMVDFTQPYIESGLAVVAPVKKVESNAWAFLRPFTPMMWGVTAIFFLVVGAVVWILEHRLNDDFRGPPKKQVVTILWFSFSTMFFAHRENTVSTLGRFVLLIWLFVVLIINSSYTASLTSILTVQQLSSPIKGIESLVKSKEPIGYLQGSFTRDYLVEEVGIHESRLVPLQKGVEIAKALKDGPWKGGVAAYVDERAFIEFFLSSRCDFTIVGQEFTRNGWGFAFPRDSPLAVDLSTAILELSENGDLQRIHDKWLLKSACLAPGAKLEVDRLDLKSFWGLYLVCGLACLLALLIYLVQMMRQYAKHYSDEIESSSQSSMSARLRTFLTFVNEKEEEVKHRSNRRQLERISSRSSSTVGGSLSSSNIYSNKEYAQSSSTKSADCGYDA 944
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5453g00050 944 FunFam Glutamate receptor 583 713 - -
Pral5453g00050 944 Gene3D - 742 781 - -
Pral5453g00050 944 FunFam Glutamate receptor 709 816 - -
Pral5453g00050 944 Gene3D - 148 425 - -
Pral5453g00050 944 Gene3D - 583 706 - -
Pral5453g00050 944 SUPERFAMILY Periplasmic binding protein-like II 447 815 - -
Pral5453g00050 944 FunFam Glutamate receptor 148 300 - -
Pral5453g00050 944 MobiDBLite consensus disorder prediction 905 921 - -
Pral5453g00050 944 CDD GluR_Plant 472 812 - -
Pral5453g00050 944 CDD PBP1_GABAb_receptor_plant 33 427 IPR044440 -
Pral5453g00050 944 Gene3D - 782 812 - -
Pral5453g00050 944 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 32 887 IPR015683 -
Pral5453g00050 944 MobiDBLite consensus disorder prediction 897 921 - -
Pral5453g00050 944 FunFam Glutamate receptor 467 583 - -
Pral5453g00050 944 SUPERFAMILY Periplasmic binding protein-like I 27 464 IPR028082 -
Pral5453g00050 944 Gene3D - 464 582 - -
Pral5453g00050 944 SMART GluR_14 473 814 IPR001320 GO:0015276|GO:0016020
Pral5453g00050 944 Pfam Ligand-gated ion channel 814 845 IPR001320 GO:0015276|GO:0016020
Pral5453g00050 944 Pfam Bacterial extracellular solute-binding proteins, family 3 495 813 IPR001638 -
Pral5453g00050 944 Gene3D - 50 400 - -
Pral5453g00050 944 Pfam Receptor family ligand binding region 49 410 IPR001828 -
Pral5453g00050 944 PIRSF IGluLR_plant 1 941 IPR017103 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5453g00050 Pral-Chr5453 271066 275536 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5453g00050 5 912 Ion Channels AT3G51480 60.703 0.0 1174
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5453g00050 K05387 - gmx:100788917 1400.57