Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5453g00049 ATGGAACTAAACTTAATATTTCATTCCAGGACACCAAATTCTCCACTGGTTTTCTCGGCATCATTGACTGTAGCATTATTATTGATGGAGAATGATACAGTGGCCATAATTGGCCCCCAATACTCAGTGATGGCTCATGTGATTTCACACATAGCCAATGAACTGCAAGTACCGTTACTATCATTTGCGGCAACAGACCCTACCTTGACTTCTCTTCAGTTCCCATATTTTGTTAGGACAACACATAGTGATCAATTTCAGATGGCTGCCATGGCAGATATTGTTGACTACTATCAATGGAGAGATGTGATAGCAATCTACATCGATGATGATCATGGAAGAAATGGGATAGTTGCATTAGAAGATAAGCTCGCTGAGAAACGTTGTAAGATCTCATATAAAGCCCCTCTTATGCCTAATAACATAAGCAGGGAAGAAATAAACAATGCATTAGTTAAGGTCATTATAAGGGAGTCCAGGGTTATAGTCCTACACATATACCCTAGTTTTGGTGTAGATGTACTTCATGTGGCTAAGTCACTAGGCATGTTGGGAAGCGGGTATGTCTGGTTGGCCACTGATTGGCTTTCCACAGTCCTAGATACTGATCCAACTAGGTCATCTTCATACATGAATGACCTTCAAGGTGTTATAACCTTGAGAATGTACACACCTGATTCTGGAACGAAAAAGAATTTATCTTCCAGGTGGAGTAATTTAGTACAGAAAAAAGCTCCTGATCAAAGTCCTTTCATGTGGAACACTTATGGCCTTTATGCCTATGACACTGTTTGGGTCCTTGCATATGCCCTTGATTCATTTTTCAATAGGGGAGGGACTTTATCATTTTCAAATGATTCAAGTCTAAACAAACTAACAGGGGGTAGACTGGACTTAAATTCTATAAATGTCTTTGCTAACGGGAGGTTATTGTTGGAAGAAACTATGAAGGTCAATAGAACTGGTCTAACAGGTCAAATGATGTTTAGTCCAGATGGTGAGCTTATGAATCCTTCATACGAAATCATTAATGTGATTGGTACTGGGGTTAGGAGGATTGGATTTTGGTCCAATTCCTCTGGTTTACAAACTGGACAAGCACCTGGTTATTCAAACTCAAGTAAAGGGCTTTATGGTGTGATATGGCCTGGCCAAACAACTGCAACACCTCGTGGTTGGGTTTTTGCCAACGATGGAAGGCATTTGAGAATTGGGGTGCCTCTCAGGATTAGTTACCATGAATTTGTGTCAAGAATTGAAGGATCTGAAATGTTCGGAGGTTATTGCATAGATGTGTTCAAAGCTGCACTAGACTTATTGCCTTATCCAGTTCCATACAATTTTGTCCCATTTGGAGATGGTAAAAGTAACCCATTAAACTCAGAACTTCTGCAAAAAATCACAAGTGGTGAGTTTGATGCTGTGGTAGGTGACATTACTATTACCACAAACAGAACAAAGATAGTGGATTTCACACAACCATATATTGAGTCTGGGCTAGTCGTTGTGGCTCCTATTAGAAAGTCAAATTCTAACGCGTGGGCTTTCCTAAGACCATTTACTCCAATGATGTGGTTTGTGACTGGAATGTCTTTCTTTGTTGTGGGAGCAGTTGTGTGGGTTTTAGAACGGCGAGTAAATGATGATTTTCGAGGTCCTGCTAGAAGACAGTTTGTGACCATTATATGGTTTAGTTTTTCAACCCTATTTTTTGCACATAGAGAGAGAACTTTGAGCACCCTGGGTCGCTTAGTGCTGATAATATGGCTATTTGTAGTCCTGATACTGAACTCCAGCTACATAGCAAGCCTGACCTCTATTCTCACAGTGGAACAGCTCTCTTCCCCAGTGAAAGGAATTGAGAGCTTAGTAACCAGCAAAGACCTCATTGGCTATCTACGAGGCTCATTTGCAGAGAACTACCTCATTGAAGAACTCAACATCATGAAATCCAGACTTGTGCCGCTGGATTCTCCATCAGAGTATGAGAAAGCCTTGAAGGATGGACCTGCCAATGGTGGTGTTGCAGCAATCATCGATGAACGTGCTTACATGGAGCTCTTTCTTTCAACCAGATGTGAATTTGGAATCGTTGGTCAAGAGTTCACCAAAATGGGTTGGGGTTTTGCCTTTCCTAGAGATTCTCCTTTGGCAATAGACATGTCAACAGCAATCTTAAAACTATCAGAGAATGGTGATCTTCAAAGAATACATGACAAATGGCTTTCAAGAAGTGCGTGCAGTTCAGAAGGCTCAAAGCAAGGCATAGACAGATTACAGCTAAGGAGCTTTTGGGGTCTCTTTCTTCTCTGTGGGATTTCCTGCTTCATAGCTCTGGTTTGTTATGTCATTCGCATGGCCTACCGTTTCAGCCGCCACTCCGACTGCGACCTTGCTGGCTTGTCGCACTCAACTCGAATCCGGTCATTTATTTCCTTTGTCAATGAAAAAGAAGAGGAAGGAAAGAATTGCAGCAAGCCAAGGAGAAGTAGAAAAGTAGCACATGAAGATGGGTCAATGGATGGCTCCAATACTGACGGTGTTCGTTATGAAAATGATCCTTCGTAG 2568 0.4159 MELNLIFHSRTPNSPLVFSASLTVALLLMENDTVAIIGPQYSVMAHVISHIANELQVPLLSFAATDPTLTSLQFPYFVRTTHSDQFQMAAMADIVDYYQWRDVIAIYIDDDHGRNGIVALEDKLAEKRCKISYKAPLMPNNISREEINNALVKVIIRESRVIVLHIYPSFGVDVLHVAKSLGMLGSGYVWLATDWLSTVLDTDPTRSSSYMNDLQGVITLRMYTPDSGTKKNLSSRWSNLVQKKAPDQSPFMWNTYGLYAYDTVWVLAYALDSFFNRGGTLSFSNDSSLNKLTGGRLDLNSINVFANGRLLLEETMKVNRTGLTGQMMFSPDGELMNPSYEIINVIGTGVRRIGFWSNSSGLQTGQAPGYSNSSKGLYGVIWPGQTTATPRGWVFANDGRHLRIGVPLRISYHEFVSRIEGSEMFGGYCIDVFKAALDLLPYPVPYNFVPFGDGKSNPLNSELLQKITSGEFDAVVGDITITTNRTKIVDFTQPYIESGLVVVAPIRKSNSNAWAFLRPFTPMMWFVTGMSFFVVGAVVWVLERRVNDDFRGPARRQFVTIIWFSFSTLFFAHRERTLSTLGRLVLIIWLFVVLILNSSYIASLTSILTVEQLSSPVKGIESLVTSKDLIGYLRGSFAENYLIEELNIMKSRLVPLDSPSEYEKALKDGPANGGVAAIIDERAYMELFLSTRCEFGIVGQEFTKMGWGFAFPRDSPLAIDMSTAILKLSENGDLQRIHDKWLSRSACSSEGSKQGIDRLQLRSFWGLFLLCGISCFIALVCYVIRMAYRFSRHSDCDLAGLSHSTRIRSFISFVNEKEEEGKNCSKPRRSRKVAHEDGSMDGSNTDGVRYENDPS 855
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5453g00049 855 PIRSF IGluLR_plant 2 852 IPR017103 -
Pral5453g00049 855 Pfam Receptor family ligand binding region 18 347 IPR001828 -
Pral5453g00049 855 FunFam Glutamate receptor 639 746 - -
Pral5453g00049 855 FunFam Glutamate receptor 513 643 - -
Pral5453g00049 855 Gene3D - 513 646 - -
Pral5453g00049 855 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 18 817 IPR015683 -
Pral5453g00049 855 MobiDBLite consensus disorder prediction 817 855 - -
Pral5453g00049 855 SUPERFAMILY Periplasmic binding protein-like I 21 393 IPR028082 -
Pral5453g00049 855 Pfam Ligand-gated ion channel 744 774 IPR001320 GO:0015276|GO:0016020
Pral5453g00049 855 Gene3D - 397 512 - -
Pral5453g00049 855 FunFam Glutamate receptor 83 243 - -
Pral5453g00049 855 Gene3D - 664 749 - -
Pral5453g00049 855 SMART GluR_14 403 744 IPR001320 GO:0015276|GO:0016020
Pral5453g00049 855 Gene3D - 83 362 - -
Pral5453g00049 855 Pfam Bacterial extracellular solute-binding proteins, family 3 427 743 IPR001638 -
Pral5453g00049 855 CDD GluR_Plant 402 742 - -
Pral5453g00049 855 PRINTS Metabotropic glutamate GPCR signature 36 62 IPR000337 GO:0004930|GO:0007186|GO:0016020
Pral5453g00049 855 PRINTS Metabotropic glutamate GPCR signature 68 87 IPR000337 GO:0004930|GO:0007186|GO:0016020
Pral5453g00049 855 PRINTS Metabotropic glutamate GPCR signature 103 120 IPR000337 GO:0004930|GO:0007186|GO:0016020
Pral5453g00049 855 PRINTS Metabotropic glutamate GPCR signature 87 103 IPR000337 GO:0004930|GO:0007186|GO:0016020
Pral5453g00049 855 Gene3D - 25 337 - -
Pral5453g00049 855 FunFam Glutamate receptor 397 513 - -
Pral5453g00049 855 SUPERFAMILY Periplasmic binding protein-like II 378 744 - -
Pral5453g00049 855 MobiDBLite consensus disorder prediction 817 839 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5453g00049 Pral-Chr5453 260312 263891 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5453g00049 3 844 Ion Channels AT3G51480 56.824 0.0 997
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5453g00049 K05387 - gmx:100790502 1328.54