Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5453g00046 ATGAAAACACCGACGACGACGGCGGCGGAGGACAAATCGGAGTTCTCACCTGTGTTTCGATCGGGAAGCTGTTCTGAGAAAGGACCCAAGCAGTACATGGAGGATGAGTTCATCGCTGTCGATATTCTCCATGAAAACCTTCCTTCTCCTGGCGCTTTTTACGGGATATTTGACGGGCACGGAGGTACGGATGCAGCATTGTTTACGAGAAAGAACATCCTCAAGTTTATCACCACAGACTCGCACTTCCCTTGCAGCATCCAAAAGGCGATCAAGAGTGCCTTTGTGAAGGTTGATCACGCCCTAGCCGATGCCATTTCTCTCGATAGATCTTCAGGCACCACTGCTTTAATAGCTTTCATGATGGGAAGAAGTATGCTAATAGCCAATATAGGCGATTCTAGAGCTGTGTTGGGAAAACGAGGGAGAGCGGTTGAACTGTCCAAGGATCACAAGCCAAACTGCACGTCGGAGAGACTAAGAATAGAGAAACTGGGCGGCGTAATCTACGACGGATACCTCAACGGCCAACTGTCGGTGGCGAGAGCACTAGGAGACTGGCACATCAAAGGCTCGAAAGGATCAAAGAGCCCACTAATCTCAGAGCCAGAGCTTGAAGAGGTGGTTTTAACACAAGAGGACGAGTACTTAATAATGGGTTGTGATGGATTATGGGACGTGATGAGCAGCCAGTGTGCTGTTACGACGGTGAGGAAGGAACTGATGCAGCACAATGATCCGGCGAGGTGTGCGAAAGCACTGGTAACTGAAGCCTTACAACGTAATACATGCGACAATCTAACTGTTGTTGTTGTCTGTTTCTCACAACATCCTCCTCCTAAGCTTCAGGTTCCTGTGCTGCACAAGAGGAGGAGCATCTCAGCTGAGGGCTTGGATCTTCTAAAGGGCGTACTCTCTTGA 921 0.4919 MKTPTTTAAEDKSEFSPVFRSGSCSEKGPKQYMEDEFIAVDILHENLPSPGAFYGIFDGHGGTDAALFTRKNILKFITTDSHFPCSIQKAIKSAFVKVDHALADAISLDRSSGTTALIAFMMGRSMLIANIGDSRAVLGKRGRAVELSKDHKPNCTSERLRIEKLGGVIYDGYLNGQLSVARALGDWHIKGSKGSKSPLISEPELEEVVLTQEDEYLIMGCDGLWDVMSSQCAVTTVRKELMQHNDPARCAKALVTEALQRNTCDNLTVVVVCFSQHPPPKLQVPVLHKRRSISAEGLDLLKGVLS 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5453g00046 306 ProSitePatterns PPM-type phosphatase domain signature. 53 61 IPR000222 GO:0043169
Pral5453g00046 306 ProSiteProfiles PPM-type phosphatase domain profile. 20 274 IPR001932 -
Pral5453g00046 306 SUPERFAMILY PP2C-like 14 276 IPR036457 -
Pral5453g00046 306 FunFam Probable protein phosphatase 2C 22 5 277 - -
Pral5453g00046 306 PANTHER PROTEIN PHOSPHATASE 2C 10 272 IPR015655 GO:0004722|GO:0006470
Pral5453g00046 306 SMART PP2C_SIG_2 37 274 IPR001932 -
Pral5453g00046 306 SMART PP2C_4 10 272 IPR001932 -
Pral5453g00046 306 CDD PP2Cc 19 274 IPR001932 -
Pral5453g00046 306 Gene3D - 1 278 IPR036457 -
Pral5453g00046 306 Pfam Protein phosphatase 2C 21 266 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5453g00046 Pral-Chr5453 223441 225094 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5453g00046 13 306 PP2C-type Phosphatase Gene Family AT3G51470 78.644 1.91e-175 486
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5453g00046 K14803 - cave:132171122 493.812