Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5453g00045 ATGGCTCCCGCCGGCACTGATCTCTTGCCTCGTCAGACGCCGACGACGATGAAAAGTGGCGGAGGTGCAATCATGGAGGATTCTAATGGCGACACTTTGGGCAATTTAAACCATTGTTGTAATAATAGTACTGCCACTGGGAAGCCTCCTAGAGATGTTTCCTCCGTGCGTCATTGCAATAGCTCTACCTTACTCGCCGATTCGGAAGCAGATATTGTGAGGGTAGACTCGATGAAAACACCGACGACGACGGCGGCGGAGGACAAATCGGAGTTCTCACCTGTGTTTCGATCGGGAAGCTGTTCTGAGAAAGGACCCAAGCAGTACATGGAGGATGAGTTCATCGCTGTCGATATTCTCCATGAAAACCTTCCTTCTCCTGGCGCTTTTTACGGGATATTTGACGGGCACGGAGGTACGGATGCAGCATTGTTTACGAGAAAGAACATCCTCAAGTTTATCACCACAGACTCGCACTTCCCTTGCAGCATCCAAAAGGCGATCAAGAGTGCCTTTGTGAAGGTTGATCACGCCCTAGCCGATGCCATTTCTCTCGATAGATCTTCAGGCACCACTGCTTTAATAGCTTTCATGATGGGAAGAAGTATGCTAATAGCCAATATAGGCGATTCTAGAGCTGTGTTGGGAAAACGAGGGAGAGCGGTTGAACTGTCCAAGGATCACAAGCCAAACTGCACGTCGGAGAGACTAAGAATAGAGAAACTGGGCGGCGTAATCTACGACGGATACCTCAACGGCCAACTGTCGGTGGCGAGAGCACTAGGAGACTGGCACATCAAAGGCTCGAAAGGATCAAAGAGCCCACTAATCTCAGAGCCAGAGCTTGAAGAGGTGGTTTTAACACAAGAGGACGAGTACTTAATAATGGGTTGTGATGGATTATGGGACGTGATGAGCAGCCAGTGTGCTGTTACGACGGTGAGGAAGGAACTGATGCAGCACAATGATCCGGCGAGGTGTGCGAAAGCACTGGTAACTGAAGCCTTACAACGTAATACATGCGACAATCTAACTGTTGTTGTTGTCTGTTTCTCACAACATCCTCCTCCTAAGCTTCAGGTTCCTGTGCTGCACAAGAGGAGGAGCATCTCAGCTGAGGGCTTGGATCTTCTAAAGGGCGTACTCTCTTGA 1152 0.4948 MAPAGTDLLPRQTPTTMKSGGGAIMEDSNGDTLGNLNHCCNNSTATGKPPRDVSSVRHCNSSTLLADSEADIVRVDSMKTPTTTAAEDKSEFSPVFRSGSCSEKGPKQYMEDEFIAVDILHENLPSPGAFYGIFDGHGGTDAALFTRKNILKFITTDSHFPCSIQKAIKSAFVKVDHALADAISLDRSSGTTALIAFMMGRSMLIANIGDSRAVLGKRGRAVELSKDHKPNCTSERLRIEKLGGVIYDGYLNGQLSVARALGDWHIKGSKGSKSPLISEPELEEVVLTQEDEYLIMGCDGLWDVMSSQCAVTTVRKELMQHNDPARCAKALVTEALQRNTCDNLTVVVVCFSQHPPPKLQVPVLHKRRSISAEGLDLLKGVLS 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5453g00045 383 SMART PP2C_SIG_2 114 351 IPR001932 -
Pral5453g00045 383 Gene3D - 76 355 IPR036457 -
Pral5453g00045 383 PANTHER PROTEIN PHOSPHATASE 2C 84 349 IPR015655 GO:0004722|GO:0006470
Pral5453g00045 383 SMART PP2C_4 87 349 IPR001932 -
Pral5453g00045 383 CDD PP2Cc 96 351 IPR001932 -
Pral5453g00045 383 SUPERFAMILY PP2C-like 90 353 IPR036457 -
Pral5453g00045 383 ProSiteProfiles PPM-type phosphatase domain profile. 97 351 IPR001932 -
Pral5453g00045 383 MobiDBLite consensus disorder prediction 1 28 - -
Pral5453g00045 383 Pfam Protein phosphatase 2C 98 343 IPR001932 -
Pral5453g00045 383 ProSitePatterns PPM-type phosphatase domain signature. 130 138 IPR000222 GO:0043169
Pral5453g00045 383 FunFam Probable protein phosphatase 2C 22 81 354 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5453g00045 Pral-Chr5453 223441 225260 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5453g00045 90 383 PP2C-type Phosphatase Gene Family AT3G51470 78.644 4.40e-174 486
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5453g00045 K14803 - fve:101296600 532.332