Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5453g00043 ATGTCTTGCTCATCGTCATCCGGGTCTGAGGAAGAGGATGAGGGCTTCGATTCCTACAGAAAAGGAGGCTACCACGCCGTCAGGGTCGGCGATCAGTTCGCCGGTGGGAGGTACATAGCACAGAGGAAGCTGGGGTGGGGTCAGTTTTCCACCGTCTGGCTCGCTTACGATACTCGCAATTCTACATATGTTGCCCTCAAAATCCAGAAAAGTGCAGCCCAGTTTGCCGAGGCCGCCCTTCATGAGATAAATGTTCTTTCATCCATTGCTGAGGGAGACCCTTCAAATTCAAAGTGTGTCGTCCAATTGATTGACAACTTTAAGCATTCAGGCCCAAATGGGCAGCACCACTGCATGGTCCTTGAGTTCCTTGGTGATAGCTTGCTTCGTCTGATCAGATATAGACGTTACAAAGGCCTTCCAATGAATAAAGTTAGAGAAATTTGTAAATGCATTTTGATTGGTTTGGATTACTTGCATAGCGAACTTCGCATAATCCACTCAGACCTAAAACCTGAAAATGTCCTCCTCTTATCCACCATTGATCCTGCCAAAGACCCAGTTAGATCTGGACAAAGCCCGATTCTGGAGAGGCCTGAGGGAAGCATAAATATGGGATTTTCAAGTGTTATTGAGAAAAAGTTGAAAAGGAGAGCCAGAAGAGCAGTTGCTAAAATATCAGGAAGAACTTCTTTAGGAGAAGCTGGAGAGGCTCCAAAATCTGATAGAAATGTTGATGGAATTGATGTGCAATGCAAGATAGTTGATTTTGGAAATGCGTGCTGGGCAGATAAGCCATTTGCAGAGGAAATCCAGACGAGGCAGTACAGAGCTCCTGAAGTTATACTGCAGGCTGGGTACTCCTCCTCTGTTGACATGTGGTCTTTTGCTTGCATTGCTTTTGAGCTCGCCACAGGTGATATGATGTTTACTCCCAAGCCAGGACAAGGTTTTAGTGAGGATGAGGACCACCTTGCCCTGATGATGGAACTCCTTGGAAAGATGCCCCGGAAGGTTGCCGTCAGTGGAGCGAAATCCAAGGATTACTTTGACAGACATGGGGATCTAAAAAGAATTAGGAGGCTAAAATTCTGGCCACTTGACAAATTTTTGATTGATAAATACAAATTTTCAGAGAGTGATGCTCGTGAGTTCTCAGAATTTATTTCTCCACTTCTGGATTTTTCCCCAGAGAAGCGGCCAACTGCACAACACTGTTTAGAACACCCATGGCTTAGTGGTCAAGCCAACTCCAAATAA 1260 0.4548 MSCSSSSGSEEEDEGFDSYRKGGYHAVRVGDQFAGGRYIAQRKLGWGQFSTVWLAYDTRNSTYVALKIQKSAAQFAEAALHEINVLSSIAEGDPSNSKCVVQLIDNFKHSGPNGQHHCMVLEFLGDSLLRLIRYRRYKGLPMNKVREICKCILIGLDYLHSELRIIHSDLKPENVLLLSTIDPAKDPVRSGQSPILERPEGSINMGFSSVIEKKLKRRARRAVAKISGRTSLGEAGEAPKSDRNVDGIDVQCKIVDFGNACWADKPFAEEIQTRQYRAPEVILQAGYSSSVDMWSFACIAFELATGDMMFTPKPGQGFSEDEDHLALMMELLGKMPRKVAVSGAKSKDYFDRHGDLKRIRRLKFWPLDKFLIDKYKFSESDAREFSEFISPLLDFSPEKRPTAQHCLEHPWLSGQANSK 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5453g00043 419 ProSiteProfiles Protein kinase domain profile. 38 412 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5453g00043 419 Gene3D Transferase(Phosphotransferase) domain 1 92 412 - -
Pral5453g00043 419 Gene3D Phosphorylase Kinase; domain 1 24 123 - -
Pral5453g00043 419 Pfam Protein kinase domain 250 412 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5453g00043 419 Pfam Protein kinase domain 39 178 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5453g00043 419 SMART serkin_6 38 412 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5453g00043 419 SUPERFAMILY Protein kinase-like (PK-like) 32 414 IPR011009 -
Pral5453g00043 419 CDD STKc_SRPK 27 412 - -
Pral5453g00043 419 FunFam Serine/threonine-protein kinase SRPK 115 412 - -
Pral5453g00043 419 ProSitePatterns Protein kinases ATP-binding region signature. 44 67 IPR017441 GO:0005524
Pral5453g00043 419 ProSitePatterns Serine/Threonine protein kinases active-site signature. 165 177 IPR008271 GO:0004672|GO:0006468
Pral5453g00043 419 PANTHER PROTEIN KINASE DOMAIN-CONTAINING PROTEIN-RELATED 8 222 - -
Pral5453g00043 419 FunFam Protein kinase superfamily protein 24 123 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5453g00043 Pral-Chr5453 212158 216169 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5453g00043 4 413 EF-hand Containing Proteins AT5G22840 52.278 4.45e-170 486
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_SRPK Pral5453g00043 Pkinase 2.5e-23 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5453g00043 K08832 - gmx:100811724 695.271