Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5453g00031 ATGGGTCTCTGCTTCGGTTCTCTCGCTTCCCGTGGTTCCGAGATTAGCGCCAGAACGCTTCATCATTCAGGGTCTGCGACTCCGGAGAGTAGGAATGTTGAGTCGTTTACAACAAACAGCATTGTAGAGAGGAGCCTGTTCTCGATGATTGCAAATGGAAGCGTCGACGGGTCCGATGATTCCCCAAATAGGCATGTAGTAGAAGCGCCTAATTGCTTGAAGGTTTTCAGTTTTGGGGATTTGAAAGCAGCCACCAAGAACTTTAAATCGGATTCATTGCTTGGAGAGGGTGGTTTTGGTAAAGTCTACAAAGGTTGGTTAGATGAGAAGACGCTTTCGCCGGCCAAAGCTGGCTTTGGAATGATGGTCGCTATAAAAAAACTCAACCCTGAGAGCATGCAAGGCTTTCAAGAGTGGAAGTCAGAAGTGAACTTCTTAGGAAGCCTTTCTCACCCAAACCTGGTCAAGCTATTTGGTTACTGCACGGAGGAGGATGAACTTCTCCTTGTATATGAGTTCATGCCTAAGGGAAGCTTAGAGAGTCATCTCTTCAGAAGGGTTTCTAACACACAACCACTTTCTTGGAACACGCGACTCAAAATAGCTATTGATGCAGCTCAAGGCCTCGCTTTCTTGCACACTTCAGAAAAGCAAATCATCTACAGAGATTTCAAGGCCTCAAATATATTACTTGATGGGAGTTACAATGCAAAAATCTCTGATTTTGGCTTGGCTAAATTAGGGCCTTCTGGAGAACAATCACACGTGACTACTAGGATCATGGGCACATACGGTTATGCTGCCCCAGAATACGTAGCCACAGGGCATTTGTATGTGAAGAGTGACGTGTATGGGTTTGGTGTAGTGCTGCTTGAAATGCTGACAGGCATGAAAGCACTTGATCCAAAGAGGCCATCTCGGCAGCAAAATCTAGTTGAGTGGGGTAAGCCATGCCTCACCAGCAAAAAGAAGTTGAAAACCATAATGGATGCCAGAATAGAGGGTCAATATTCACTCAGTGCGGCTTTTCAAGCAGCTCAGCTTATTCTCAAGTGCCTAGAACCTGACCCCAAGAATCGCCCTGGTATGAAAGATGTAGTCGAGGAATTGCAAGGTATTGAATCTACCCAGAGCAAGTCAAAAGGTTCCAAGAAATGTTGCCAATCTTCACCTCTTCATCATCATAAAAAGCCTATGCATCATTGA 1206 0.4527 MGLCFGSLASRGSEISARTLHHSGSATPESRNVESFTTNSIVERSLFSMIANGSVDGSDDSPNRHVVEAPNCLKVFSFGDLKAATKNFKSDSLLGEGGFGKVYKGWLDEKTLSPAKAGFGMMVAIKKLNPESMQGFQEWKSEVNFLGSLSHPNLVKLFGYCTEEDELLLVYEFMPKGSLESHLFRRVSNTQPLSWNTRLKIAIDAAQGLAFLHTSEKQIIYRDFKASNILLDGSYNAKISDFGLAKLGPSGEQSHVTTRIMGTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTGMKALDPKRPSRQQNLVEWGKPCLTSKKKLKTIMDARIEGQYSLSAAFQAAQLILKCLEPDPKNRPGMKDVVEELQGIESTQSKSKGSKKCCQSSPLHHHKKPMHH 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5453g00031 401 CDD STKc_IRAK 94 373 - -
Pral5453g00031 401 Gene3D Transferase(Phosphotransferase) domain 1 174 394 - -
Pral5453g00031 401 MobiDBLite consensus disorder prediction 371 387 - -
Pral5453g00031 401 Gene3D Phosphorylase Kinase; domain 1 72 173 - -
Pral5453g00031 401 MobiDBLite consensus disorder prediction 368 401 - -
Pral5453g00031 401 ProSiteProfiles Protein kinase domain profile. 88 373 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5453g00031 401 Pfam Protein tyrosine and serine/threonine kinase 91 370 IPR001245 GO:0004672|GO:0006468
Pral5453g00031 401 FunFam Serine/threonine-protein kinase BIK1 54 173 - -
Pral5453g00031 401 SUPERFAMILY Protein kinase-like (PK-like) 74 375 IPR011009 -
Pral5453g00031 401 ProSitePatterns Serine/Threonine protein kinases active-site signature. 219 231 IPR008271 GO:0004672|GO:0006468
Pral5453g00031 401 PANTHER OS01G0588500 PROTEIN-RELATED 55 374 - -
Pral5453g00031 401 FunFam Serine/threonine-protein kinase PBS1 174 389 - -
Pral5453g00031 401 ProSitePatterns Protein kinases ATP-binding region signature. 94 127 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5453g00031 Pral-Chr5453 146981 151691 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5453g00031 74 370 Glycoside Hydrolase AT3G07070 50.336 1.84e-100 303
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Pral5453g00031 PK_Tyr_Ser-Thr 2.3e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5453g00031 - - qsa:O6P43_033520 558.525