Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5453g00024 ATGCAAAACCCTGGCAAAGATTCCACAACCACTACTAAGTCTCCTTCTTCCTCTCATCCTGATCAACCCCCTCCTCCTCCTGGCCCCACTCAAACTGTCGCCGGTGATGTCACCGCAACCGGAGGAGGAGGAAGCAGCGTAGGAGGTATCGCCGGCTCCGATGCTAGAATAGTCCAAGTGGTGGACCCTACTCCTGTTGGTGATGGATCTTCAGTGGCGGGAGCAGCCGGTGGTGAAGGTGGGTCCTCTGCGGCGGTGGTGAGTGTGGAAGGTGGAGTGATGGTGGTGGAAGGTGGGTCGTCGGTGGCTTCAAAGCCGGGGGAGAAACCGGGTAAGCAGAAGCGGAAGTCGTCTCAACTGTCAGATCCTCCGCCGTGGCCACCCAAATGCAACGAGTGCGGGAAAGAGTTTCCCAGTTGGAAAGCTGCGTTTGGACATATGAGGGCGCACCCGGAACGCGATTATCGAGGTTTCTTCAGACCTCCTACTTCCTCTTCTTCATCATCACCAACAAGGCAACGCGTTCGCCTAGCTGCAGGAGAGAATATTAATACAGGTGTGGAAGAACAAGGTGGAGGGCAGAAGGGAGGATCATCGGGTGCCGGAGGGGTTGGGTTTGATCTGAATCAGCCGACTACGGAGGAAGTGGAATCTTCTAATTCTGAGGCTGTACAGAGAAACCAAGCACTGGACTCTACTTCTTTGGCTGCAGAAAGGAGTGCTGCTCAAGAGGAAAAGAAAGTTGGGTTTGACCTGAACGAACTTCCTGCTTCTGAAGAAGATGATCATCATCAACACAAGCCCTAA 807 0.539 MQNPGKDSTTTTKSPSSSHPDQPPPPPGPTQTVAGDVTATGGGGSSVGGIAGSDARIVQVVDPTPVGDGSSVAGAAGGEGGSSAAVVSVEGGVMVVEGGSSVASKPGEKPGKQKRKSSQLSDPPPWPPKCNECGKEFPSWKAAFGHMRAHPERDYRGFFRPPTSSSSSSPTRQRVRLAAGENINTGVEEQGGGQKGGSSGAGGVGFDLNQPTTEEVESSNSEAVQRNQALDSTSLAAERSAAQEEKKVGFDLNELPASEEDDHHQHKP 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5453g00024 268 PANTHER ZINC FINGER PROTEIN ZAT2-RELATED 14 169 - -
Pral5453g00024 268 MobiDBLite consensus disorder prediction 1 17 - -
Pral5453g00024 268 MobiDBLite consensus disorder prediction 160 175 - -
Pral5453g00024 268 MobiDBLite consensus disorder prediction 98 136 - -
Pral5453g00024 268 MobiDBLite consensus disorder prediction 211 239 - -
Pral5453g00024 268 ProSitePatterns Zinc finger C2H2 type domain signature. 130 150 IPR013087 -
Pral5453g00024 268 MobiDBLite consensus disorder prediction 153 268 - -
Pral5453g00024 268 ProSiteProfiles Zinc finger C2H2 type domain profile. 128 155 IPR013087 -
Pral5453g00024 268 MobiDBLite consensus disorder prediction 240 268 - -
Pral5453g00024 268 MobiDBLite consensus disorder prediction 1 83 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5453g00024 Pral-Chr5453 121972 123018 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5453g00024 130 167 C2H2 Transcription Factor Family AT4G35280 58.140 5.20e-11 60.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Pral5453g00024 zf-C2H2_6 1.3e-05 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5453g00024 - - pcin:129310892 220.705