Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pral5453g00024 | ATGCAAAACCCTGGCAAAGATTCCACAACCACTACTAAGTCTCCTTCTTCCTCTCATCCTGATCAACCCCCTCCTCCTCCTGGCCCCACTCAAACTGTCGCCGGTGATGTCACCGCAACCGGAGGAGGAGGAAGCAGCGTAGGAGGTATCGCCGGCTCCGATGCTAGAATAGTCCAAGTGGTGGACCCTACTCCTGTTGGTGATGGATCTTCAGTGGCGGGAGCAGCCGGTGGTGAAGGTGGGTCCTCTGCGGCGGTGGTGAGTGTGGAAGGTGGAGTGATGGTGGTGGAAGGTGGGTCGTCGGTGGCTTCAAAGCCGGGGGAGAAACCGGGTAAGCAGAAGCGGAAGTCGTCTCAACTGTCAGATCCTCCGCCGTGGCCACCCAAATGCAACGAGTGCGGGAAAGAGTTTCCCAGTTGGAAAGCTGCGTTTGGACATATGAGGGCGCACCCGGAACGCGATTATCGAGGTTTCTTCAGACCTCCTACTTCCTCTTCTTCATCATCACCAACAAGGCAACGCGTTCGCCTAGCTGCAGGAGAGAATATTAATACAGGTGTGGAAGAACAAGGTGGAGGGCAGAAGGGAGGATCATCGGGTGCCGGAGGGGTTGGGTTTGATCTGAATCAGCCGACTACGGAGGAAGTGGAATCTTCTAATTCTGAGGCTGTACAGAGAAACCAAGCACTGGACTCTACTTCTTTGGCTGCAGAAAGGAGTGCTGCTCAAGAGGAAAAGAAAGTTGGGTTTGACCTGAACGAACTTCCTGCTTCTGAAGAAGATGATCATCATCAACACAAGCCCTAA | 807 | 0.539 | MQNPGKDSTTTTKSPSSSHPDQPPPPPGPTQTVAGDVTATGGGGSSVGGIAGSDARIVQVVDPTPVGDGSSVAGAAGGEGGSSAAVVSVEGGVMVVEGGSSVASKPGEKPGKQKRKSSQLSDPPPWPPKCNECGKEFPSWKAAFGHMRAHPERDYRGFFRPPTSSSSSSPTRQRVRLAAGENINTGVEEQGGGQKGGSSGAGGVGFDLNQPTTEEVESSNSEAVQRNQALDSTSLAAERSAAQEEKKVGFDLNELPASEEDDHHQHKP | 268 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pral5453g00024 | 268 | PANTHER | ZINC FINGER PROTEIN ZAT2-RELATED | 14 | 169 | - | - | |
Pral5453g00024 | 268 | MobiDBLite | consensus disorder prediction | 1 | 17 | - | - | |
Pral5453g00024 | 268 | MobiDBLite | consensus disorder prediction | 160 | 175 | - | - | |
Pral5453g00024 | 268 | MobiDBLite | consensus disorder prediction | 98 | 136 | - | - | |
Pral5453g00024 | 268 | MobiDBLite | consensus disorder prediction | 211 | 239 | - | - | |
Pral5453g00024 | 268 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 130 | 150 | IPR013087 | - | |
Pral5453g00024 | 268 | MobiDBLite | consensus disorder prediction | 153 | 268 | - | - | |
Pral5453g00024 | 268 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 128 | 155 | IPR013087 | - | |
Pral5453g00024 | 268 | MobiDBLite | consensus disorder prediction | 240 | 268 | - | - | |
Pral5453g00024 | 268 | MobiDBLite | consensus disorder prediction | 1 | 83 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pral5453g00024 | Pral-Chr5453 | 121972 | 123018 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pral5453g00024 | 130 | 167 | C2H2 Transcription Factor Family | AT4G35280 | 58.140 | 5.20e-11 | 60.1 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | C2H2 | Pral5453g00024 | zf-C2H2_6 | 1.3e-05 | CL0361 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pral5453g00024 | - | - | pcin:129310892 | 220.705 |