Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5453g00020 ATGGTGATTTCTCGTGAGAACAATGTGAACTCCATCAAACCCACAAGCCTGCAAGGAGGAGTGGTCGGAGAGAATAGAAGGGCACTGAGCGTCATCAATCAGAACCTGGTCGTGGAGTGTGGACACAACAAGAAGATTGCCAATCCAGTGCATCGACCAATTACCAGGAAATATGCAGCACAAATTGCTCCCACAAAGCGGCCACTCGCCGAGGAAGATAAGAAGTCGAATAATGCATCAAGTTTAAATTCAAATGGATTTGGAGAATGCATATTTTTGGATGAAGAACACAAGTCAGTGAAGGACCAGCCGGTACCCATGTCTTTAGAACAATCAGAAGAAGAAATGCAGACTGAAACAGATCAGATGGAAGTTGAGATGGAGGATATAGTTGAAGATCCTATCATGGACATTGATTGCAGTGACGTGAGCAATCATCTTGCAGCTGTAGACTATGTTCAAGAACTTTATTCTTACTACAGAAAAATGGAGATTAGTAGCTGCGTCTCACCACATTATATGTCACAACAAGTTGACATTAATGAAAGGATGAGGGCTATACTGATTGACTGGCTCATTGAGGTGCAAGACAAGTTTGATCTTATGCGTGAGACTTTGTTTCTTACAGTGAACCTAATAGATAGGTTTTTGGAGAAGCAATCAGTGGTAAGGAAGAGGCTTCAATTGGTGGGTTTAGTGGCCATGCTTTTGGCATGCAAGTATGAGGAAGTTTCGGTTCCTGTGGTGGAGGATCTGATACTTATATCAGACAAAGCATATACAAGGAAAGAAATTCTTGAAATGGAGAAGTTGATGCTTAGCACATTGCAGTTTAACATGACTGTGCCCACACCATATGTGTTTATGAGACGGTTTCTAAAGGCTGCTCAAGCAGATAAAAAAATGGAGTTGCTAGCTTTCTTCTTAATAGAGATATCTCTTGTGGAGTATGGGATGTTGAAGTTCCCACCATCTTTGCTAGCTGCAGCTGCAATTTTTACAGCTCAATGCACCATCTATGGTTTCCAGCAATGGAACAAGACATGCGAATGGCACACAAACTACTCAGAAGATCAGCTATTGTGA 1086 0.418 MVISRENNVNSIKPTSLQGGVVGENRRALSVINQNLVVECGHNKKIANPVHRPITRKYAAQIAPTKRPLAEEDKKSNNASSLNSNGFGECIFLDEEHKSVKDQPVPMSLEQSEEEMQTETDQMEVEMEDIVEDPIMDIDCSDVSNHLAAVDYVQELYSYYRKMEISSCVSPHYMSQQVDINERMRAILIDWLIEVQDKFDLMRETLFLTVNLIDRFLEKQSVVRKRLQLVGLVAMLLACKYEEVSVPVVEDLILISDKAYTRKEILEMEKLMLSTLQFNMTVPTPYVFMRRFLKAAQADKKMELLAFFLIEISLVEYGMLKFPPSLLAAAAIFTAQCTIYGFQQWNKTCEWHTNYSEDQLL 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5453g00020 361 PIRSF Cyclin_A_B_D_E 3 361 IPR046965 GO:0016538|GO:0044772
Pral5453g00020 361 Gene3D - 169 281 - -
Pral5453g00020 361 ProSitePatterns Cyclins signature. 185 216 IPR006671 -
Pral5453g00020 361 Pfam Cyclin, C-terminal domain 283 360 IPR004367 -
Pral5453g00020 361 CDD CYCLIN_AtCycB-like_rpt1 132 278 - -
Pral5453g00020 361 Gene3D - 156 360 - -
Pral5453g00020 361 SMART cyclin_7 287 361 IPR013763 -
Pral5453g00020 361 SMART cyclin_7 190 274 IPR013763 -
Pral5453g00020 361 Pfam Cyclin, N-terminal domain 156 280 IPR006671 -
Pral5453g00020 361 SUPERFAMILY Cyclin-like 282 360 IPR036915 -
Pral5453g00020 361 Coils Coil 109 133 - -
Pral5453g00020 361 SUPERFAMILY Cyclin-like 144 280 IPR036915 -
Pral5453g00020 361 SMART Cyclin_C_2 283 361 IPR004367 -
Pral5453g00020 361 PANTHER CYCLINS 113 341 IPR039361 -
Pral5453g00020 361 FunFam G2/mitotic-specific cyclin 169 281 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5453g00020 Pral-Chr5453 92079 95738 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5453g00020 1 361 Core Cell Cycle Gene Families AT1G20610 54.756 7.55e-138 397
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5453g00020 K21777 - gmx:100798068 494.967