Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5453g00001 ATGCCAGTACCCTTAAGAAAATGTCAAGGCGTGGCCAAGCAGGCGGAACAAATCTTGCCACGTGGACAAGAAGTAGGAAGAGCTATCCACGACTGTCAGTGGCAAATCGCCAGGACGAGCCCACTTCTTGGCCGCTACCGTGCTCTGTTCTCGTTCTCACTTTCCGCTTGGCAATTGAAAACCATTCGTTTCCACTTCCCTTTCATTCTCAAGCTCTCTGAAACACCACCATCACAAAACCATGATGACGACGTCGATTCGTATCTCGGCTTCCTCCTCTCTCCTCCTCTCCGCTCCGCCAAGCTGGATCATGCTCCAAGAATTTCATTTCTGAAACCGTTGAAGTCTCGTCAGGCGCGGAGCGTTAGTGTTGTTAAAGCCAACTTTCCAAACTACTGCACGAAAGCTGCTCTGAACGGGAATTTGGAGACCGTCGGAGTTCCGACGTCGGTGCCAGTGCGTGTAGCCCATGAGCTGCTTCTTGCTGGACATCGCTATTTGGATGTGAGAACTCCCGAAGAATTCAACGCAGGACACGCTCCAGGCGCAATTAACGTACCATACATGTACAGAGTTGGATCAGGTATGACAAAGAATGCCAATTTTGTTGCAGAAGTCTCATCACATTTTAGAAAAGATGATGAGATTATTGTTGGTTGTCAACTTGGTAAAAGGTCCATGATGGCTGCTACTGACTTGTTAGTTGCTGGATTTTCTGGAATTACAGACATAGCTGGGGATTCGCTGCTTGGACTCAAAATGGACTTCCAACAGAACAGTGAAGTGCCAAGGCGGGACTTACAACTTTTAAACTGTATAGAATTAGGTTTCTTGCTGGGAGTTCCATGA 849 0.477 MPVPLRKCQGVAKQAEQILPRGQEVGRAIHDCQWQIARTSPLLGRYRALFSFSLSAWQLKTIRFHFPFILKLSETPPSQNHDDDVDSYLGFLLSPPLRSAKLDHAPRISFLKPLKSRQARSVSVVKANFPNYCTKAALNGNLETVGVPTSVPVRVAHELLLAGHRYLDVRTPEEFNAGHAPGAINVPYMYRVGSGMTKNANFVAEVSSHFRKDDEIIVGCQLGKRSMMAATDLLVAGFSGITDIAGDSLLGLKMDFQQNSEVPRRDLQLLNCIELGFLLGVP 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5453g00001 282 CDD RHOD 167 246 - -
Pral5453g00001 282 Pfam Rhodanese-like domain 166 242 IPR001763 -
Pral5453g00001 282 SMART rhod_4 150 258 IPR001763 -
Pral5453g00001 282 PANTHER RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 15, CHLOROPLASTIC 108 246 - -
Pral5453g00001 282 ProSiteProfiles Rhodanese domain profile. 160 248 IPR001763 -
Pral5453g00001 282 Gene3D - 138 248 IPR036873 -
Pral5453g00001 282 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 146 246 IPR036873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5453g00001 Pral-Chr5453 2440 5321 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5453g00001 150 261 Sulfurtransferasese or Rhodanese AT5G66170 42.982 3.59e-25 95.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5453g00001 - - aprc:113868825 212.616