Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pral5452g00034 | ATGTGTTCTGTCACGGCGGCGCCTTTTCAGTGTTTTAGTGGAAAGCAACTGAGAGGCCTTGTGATATTCCAAGGTGTGCGAGGACATTGGGGCTGTTTGAATAGGAGGATGAGATGTAATTATTTTCTCCCATCCAAATTGTCAAAAATGTGCAATCGATTAAAGCACAGGTTTGCAGAGAAGCTGCTGCTGGACATTGAAGGACCTGGTTCAAGAAGTAGCTCAAAGTTTCATAACAAGGTATCTGTTGTCATGGATTATGACCTTCCTGATGGAAATGAGAAAGGTGAAAAGAAATCTGAAATGAATCTTAAAGGTGAAGTAGATGAGGTGGACATCTCCATGGTATGTAAAAGATTTCCATCAATCATTTTGGGTCGTGCTTCTCAAGTGGCTTTGTATGATGGGACCACGTCTCTCCCTGAAATTACAAGCATTCTAGAAACAGTGGATTTAGAGCAGTATTTTTCTAATTCTTCTGAGGCAAGGTGGGTGCAAAATCCGGTCTCTGAAGCTCAGCCTTCTGCATATGCCAATCATTCGGGTGTAAAATCTTCTTCCGTAAGAAAAGAAGATTCTTATACTTGTCCTTTATCACCTCATTCAACATCTTCAATATATGAAGAAAAATTGGATCATCCAGTCACCAAGGAGAATTCTTGTGGGAAAGCGGGGTTGCAGTCCCACTTCAACCTTACACCCAATGAGTTATTTCTTGACAAGTCCATTAATTGTATACCTGGATTAAGTAAGAGAAATTGCCAGCAGCTAGAAAACTGTGGCTTTCACACGTTACGGAAATTGCTACACCATTTTCCACGAACATATGCTGATCTACAGAATGCACATTCTCAAATTACTGATGGGCAGTATTTGATTTTTGTTGGAAAAATCTTATCTTCAAGGGGAGTCAAAGCTAGTTTTTCCTTTTCATTTCTTGAGGTGGTTGTGGAATGTCAGGTTGTGGTTAGTGAATCAGCTATGCAACATGTGACAGGCAATATTACTGACAATGGGAAAGAGACAGTTTATTTGCATCTGAAGAAATTTTTCCGTGGCACTCGTTTTACCTGTAAGCCTTTTTTAAATAGTCTTGCTGAGAAGTATCAAAAAGGAGATTTAGCATGTGTGAGTGGCAAGGTGAGGACTATGCGTGCTAAAAATCATTATGAGATGAGAGATTATAATCTTGATGTGCTTGATGATGGCAACGATTCATCCTTCTGTGCTAAAGAAAGGCCATATCCAATCTACCCTTCCAAAGGAGGTTTGAACCCAGATTTTCTCAGGGATATCATTGCAAGAGGCTTACAGGCCTTGCCTGTCAATATTGATCCAATACCTCAAGAAATCACTCAGGAATTTGGTTTATTAAGTCTTCATGATGCATATACTGGGATTCACAAACCAAAGGATATCACTGAAGCTGATTTGGCTCGCAAGAGGCTTATATTTGATGAATTTTTTTACCTGCAGTTAGGCCGCTTATTCCAAATGCTTGAAGGTCTTGGTACAAAAATGGAAAAGGATGTATTGCTAGATAAGTATCGGAAAACAGAAGATAATGCTGGGTGTACAGAGACATGGTCATGTCTCACCAAAAAGTTTCTGGACGCACTTCCATATAGTCTTACAGCTGGTCAACTTCGTGCGGTTTCCGAAATTATTTGGGATCTGAAAAGGCCAGTCCCTATGAACCGACTACTGCAGGGTGATGTTGGGTGCGGAAAAACTGTGGTAGCTTTTCTGGCTTGCATGGAGGTTATTGGTTCTGGATATCAAGCGGCGTTCATGGTTCCAACAGAGCTGCTTGCGATCCAGCATTACCAGCACTTGCTTAATTTGCTAGAGAATTTGGCTGAGGTTGAGCGCAGACCCACAGTCGCTTTACTCACAGGTTCAACCCCACTAAAACAGTCTCGGCTGATTCGTAAGGGTATCCAGACTGGAGAAATCTCGATTGTCATAGGAACTCACAGTTTAATATCAGAAAATGTGGAATTTTCTGCTTTACGTATTGCTGTAGTAGACGAGCAGCACCGTTTCGGTGTGATTCAAAGAGGAAGGTTTAACAGTAAGTTATATTACACTTCATCAGTTTCTCATATGGAAGATGCCAGTTCAAATGGATCCCCAAAGAGTGATAGTGATGTATACATGGCTCCTCATGTTCTTGCTATGTCTGCTACTCCCATCCCAAGGACACTTGCTCTTGCTTTATATGGTGATATGTCACTGACAGAGATAACTGACTTGCCTCCTGGTAGAATTCCTGTTCAAACATACGCAATTGAAGGAAATGAAAATGGATATGAGTATGTCTACAAGATGATGATGGATGAGTTGGAAGACAGGGGGAAAGTATATCTTGTTTACCCAATTATCGAACTTTCTGAGCAGCTACCACAGCTTCGTGCAGCTTCTGCAGATCTAGAAGTCATATCACGTCGGTTTCAAGGATACAACTGTGGTTTATTACATGGGAAAATGAAAAGTGATGAAAAAGAGGAAGCATTGAGAAGGTTTAGGACTGGAGAAATGCATATCCTGCTTTCCACACAAGTAATTGAGATTGGTGTTGATGTTCCTGATGCATCTATGATGGTTGTCATGAATGCTGAGAGATTTGGGATTGCTCAGTTGCACCAACTTAGAGGACGAGTTGGACGTGGGGCAAGGAAATCTAAATGTATACTAATAGCATCTGCTGCTGGTAGCCTTAACCGATTGAAAGTACTTGAGCGCTCATCAGATGGCTTTTACCTTGCTAAAATGGACCTTTTATCACGGGGACCTGGTGACTTGCTTGGAAAGAAACAATCAGGACATCTTCCAGAGTTTCCTATCGCTAGATTGGAAGTTGATGGGAATATCTTACAAGATTCGCACCTTGCTGCACTGAAAATTCTAAGCACTTCCCATGATTTGGAGCAGTTCCCTGCGCTTAAACTGGAGCTTAGCATGAGACAGCCACTTTGCCTGCTCGGCGATTGA | 2994 | 0.4155 | MCSVTAAPFQCFSGKQLRGLVIFQGVRGHWGCLNRRMRCNYFLPSKLSKMCNRLKHRFAEKLLLDIEGPGSRSSSKFHNKVSVVMDYDLPDGNEKGEKKSEMNLKGEVDEVDISMVCKRFPSIILGRASQVALYDGTTSLPEITSILETVDLEQYFSNSSEARWVQNPVSEAQPSAYANHSGVKSSSVRKEDSYTCPLSPHSTSSIYEEKLDHPVTKENSCGKAGLQSHFNLTPNELFLDKSINCIPGLSKRNCQQLENCGFHTLRKLLHHFPRTYADLQNAHSQITDGQYLIFVGKILSSRGVKASFSFSFLEVVVECQVVVSESAMQHVTGNITDNGKETVYLHLKKFFRGTRFTCKPFLNSLAEKYQKGDLACVSGKVRTMRAKNHYEMRDYNLDVLDDGNDSSFCAKERPYPIYPSKGGLNPDFLRDIIARGLQALPVNIDPIPQEITQEFGLLSLHDAYTGIHKPKDITEADLARKRLIFDEFFYLQLGRLFQMLEGLGTKMEKDVLLDKYRKTEDNAGCTETWSCLTKKFLDALPYSLTAGQLRAVSEIIWDLKRPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVPTELLAIQHYQHLLNLLENLAEVERRPTVALLTGSTPLKQSRLIRKGIQTGEISIVIGTHSLISENVEFSALRIAVVDEQHRFGVIQRGRFNSKLYYTSSVSHMEDASSNGSPKSDSDVYMAPHVLAMSATPIPRTLALALYGDMSLTEITDLPPGRIPVQTYAIEGNENGYEYVYKMMMDELEDRGKVYLVYPIIELSEQLPQLRAASADLEVISRRFQGYNCGLLHGKMKSDEKEEALRRFRTGEMHILLSTQVIEIGVDVPDASMMVVMNAERFGIAQLHQLRGRVGRGARKSKCILIASAAGSLNRLKVLERSSDGFYLAKMDLLSRGPGDLLGKKQSGHLPEFPIARLEVDGNILQDSHLAALKILSTSHDLEQFPALKLELSMRQPLCLLGD | 997 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pral5452g00034 | 997 | ProSiteProfiles | Superfamilies 1 and 2 helicase C-terminal domain profile. | 774 | 928 | IPR001650 | - | |
Pral5452g00034 | 997 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 445 | 753 | IPR027417 | - | |
Pral5452g00034 | 997 | Pfam | Helicase conserved C-terminal domain | 773 | 891 | IPR001650 | - | |
Pral5452g00034 | 997 | PANTHER | ATP-DEPENDENT DNA HELICASE HOMOLOG RECG, CHLOROPLASTIC | 37 | 992 | IPR047112 | GO:0006281 | |
Pral5452g00034 | 997 | Gene3D | - | 759 | 930 | IPR027417 | - | |
Pral5452g00034 | 997 | Pfam | DEAD/DEAH box helicase | 566 | 734 | IPR011545 | GO:0003676|GO:0005524 | |
Pral5452g00034 | 997 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 753 | 946 | IPR027417 | - | |
Pral5452g00034 | 997 | NCBIfam | ATP-dependent DNA helicase RecG | 260 | 963 | IPR004609 | GO:0003678|GO:0006281|GO:0006310 | |
Pral5452g00034 | 997 | CDD | DEXHc_RecG | 483 | 753 | - | - | |
Pral5452g00034 | 997 | Gene3D | - | 498 | 750 | IPR027417 | - | |
Pral5452g00034 | 997 | Pfam | ATP-dependent DNA helicase RecG, domain 3, C-terminal | 917 | 975 | IPR045562 | - | |
Pral5452g00034 | 997 | SUPERFAMILY | Nucleic acid-binding proteins | 238 | 440 | IPR012340 | - | |
Pral5452g00034 | 997 | SMART | ultradead3 | 540 | 760 | IPR014001 | - | |
Pral5452g00034 | 997 | ProSiteProfiles | Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. | 558 | 749 | IPR014001 | - | |
Pral5452g00034 | 997 | SMART | helicmild6 | 795 | 892 | IPR001650 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pral5452g00034 | Pral-Chr5452 | 135283 | 150858 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pral5452g00034 | 817 | 936 | Eukaryotic Initiation Factors Gene Family | AT3G19760 | 25.000 | 8.43e-06 | 47.4 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pral5452g00034 | K03655 | - | qsa:O6P43_032612 | 1403.65 |