Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5452g00027 ATGGAGGCTGATGTTGATACAGTGAGTTCCTCATCACCATCTTACTACAGCATTCTCGGTGTCGATTCGGATTCTTCTCTCGAAGAAATAAGGCGCGCTTATCGCAAGCTTGCAATGCAATGGCATCCGGATCGGTGGACGAGAACACCAACCCTACTGAGTGAAGCAAAACGAAAGTTCCAAGAAATTCAGGAAGCCTACTCAGTGTTATCGGACGAAAGCAAAAGAACCATGTACGATGCAGGCTTATACGATCCCCAAGAAGAAGAGGATGAGGAGTTTTATGACTTTGTGCAAGAGCTAAAGACGCAAGTGAGCAGAGAGGAGAAGGAATATAGCATAGAGGAGTTGCAAAGTATGCTGATGGAAATGGTTCAAGGATTCGAGAATCCTTCATGGCAATTTGGAGCCTCACCGGTGGATGAGGAGAGCCAGTGCTCAAAGAGGGCTCGCCTGGACTCGAACTTGAAGATGAACTTAGGGTCACCTTTCTATGAGCCTGGGCTTCACTTGTTTGAAACGAGGGGCTTCTGTAGTTAG 540 0.4704 MEADVDTVSSSSPSYYSILGVDSDSSLEEIRRAYRKLAMQWHPDRWTRTPTLLSEAKRKFQEIQEAYSVLSDESKRTMYDAGLYDPQEEEDEEFYDFVQELKTQVSREEKEYSIEELQSMLMEMVQGFENPSWQFGASPVDEESQCSKRARLDSNLKMNLGSPFYEPGLHLFETRGFCS 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5452g00027 179 CDD DnaJ 18 72 IPR001623 -
Pral5452g00027 179 PANTHER PUTATIVE, EXPRESSED-RELATED 10 137 - -
Pral5452g00027 179 Coils Coil 53 73 - -
Pral5452g00027 179 ProSiteProfiles dnaJ domain profile. 14 83 IPR001623 -
Pral5452g00027 179 SMART dnaj_3 13 75 IPR001623 -
Pral5452g00027 179 Coils Coil 98 118 - -
Pral5452g00027 179 Pfam DnaJ domain 15 80 IPR001623 -
Pral5452g00027 179 SUPERFAMILY Chaperone J-domain 11 86 IPR036869 -
Pral5452g00027 179 ProSitePatterns Nt-dnaJ domain signature. 60 79 IPR018253 -
Pral5452g00027 179 Gene3D DnaJ domain 3 111 IPR036869 -
Pral5452g00027 179 PRINTS DnaJ domain signature 55 75 IPR001623 -
Pral5452g00027 179 PRINTS DnaJ domain signature 34 49 IPR001623 -
Pral5452g00027 179 PRINTS DnaJ domain signature 16 34 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5452g00027 Pral-Chr5452 93772 95936 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5452g00027 15 81 C2H2 Transcription Factor Family AT1G74250 45.588 8.71e-13 63.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5452g00027 - - cave:132179194 222.246