Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5452g00014 ATGCTGGACAAAGATTTCTTCACTGAGTATGGAGAGGCAAGTCGGTATGAAATTCAAGAAGTTGTCGGAAAGGGCAGCTATGGTGTTGTTGCATCTGCAATTGATACATACAGTGGAGACAGGGTTGCTATCAAGAAGATGAACAATGTGTTTGAACATGTCTCTAGTGCCACTCGCATTCTTCGGGAAATAGAGCTCCTTCGGCTGCTCAAACATCCAGATATAGTAGAAATAAAGCACATAATGCTTCCTCCATGTCAAAGAGAATTTGAAGACATTTATGTGGTATTTGAGTTAATGGAATCTGATCTTCATGAAGTTATTGAAGCCAACCATGATCTCACTCCTGGACATTACCAATTCTTCTTGTATCAGCTTCTTCGAGCTCTAAAATACATACATTCAGCGAATGTCTTCCATCGAGACTTGAAACCAAAAAACATTCTGGCTAATGCAGACTGCAAACTAAAGATTTGTGATTTTGGGCTTGCCCGTGCATCATTTGATGAGGCCCCATCTGCTATTTTTTGGACAGATTATGTTGCGACTCGATGGTATCGTGCTCCAGAACTATGTGGCTCTTTTTTCTCCAAGTACACCCCTGCCATAGATATCTGGAGCATAGGATGTATTTTTGCGGAGATGCTAACTGGGGAGCCTTTGTTTCCCGGAAAGAATGTGAGGCATCAATTGGATCTTATAACTGATTTGCTTGGAACTCCTTCTGTTGAATGCATTGCAAGGATACGGAATGAAAAAGCTAGAACATATTTAAATAGCATGGGGAGAAAGCCATCCATTCCTTTATCAGAAAAATTTCCTCATGCAGACCCAATGGCTCTTCGTTTACTTCAGCGCTTGCTTGCGTTCGATCCTACTGAGCGTCCTTCTGCTGAAGAGGCACTTGCCGATCCCTATTTTTATGGTTTGGCAAATTTGGCTGATGAACCATCCATGAAACCAATTTCGAAGTTTGAGTTCGAGTTTGAAAGAAGAAAATTGACTAAAGATGATATAAGAGAACTAATATATAGAGAGATTTTAGAATATCATCCAGAGATGCTGCAGGAGTATGCTCATGGTGCAGGGAAGATTAGCTTTATGTATCCCAGTGGACTTGATGGCTTCAAGCACCGATTTGCTGATCTTGAGGAAAATAATAGCAGAAGGGAAAGAAGCACACTGCTATATAGGAAATATGCCTCATTGCCCAGGGAGCGGGTATGCGCAGCTGAGGAAGAGGAGGAGGAGGAGGAGGAGGAGGAGGAAACGAACAGAAATTCGCTCAAGAAGGAGAATGCAGCTTCTGTTGTGCGTGCAAGCATTCTGAGTCCTCCAGGGTCCCGGAATGGTAAAAAAATGGAAGATGCTCGCGGAAACTCATTAATAATGCAGAACAACCGATGCAAAACAGCTTATAAGGGCCATAGACTTGTAAAGAGTGCTAGTCTGAATAATTCTATGTGGGCAGTTGTCATGGATCCAAAACCAGGAAGTAAATTTTAA 1506 0.421 MLDKDFFTEYGEASRYEIQEVVGKGSYGVVASAIDTYSGDRVAIKKMNNVFEHVSSATRILREIELLRLLKHPDIVEIKHIMLPPCQREFEDIYVVFELMESDLHEVIEANHDLTPGHYQFFLYQLLRALKYIHSANVFHRDLKPKNILANADCKLKICDFGLARASFDEAPSAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEMLTGEPLFPGKNVRHQLDLITDLLGTPSVECIARIRNEKARTYLNSMGRKPSIPLSEKFPHADPMALRLLQRLLAFDPTERPSAEEALADPYFYGLANLADEPSMKPISKFEFEFERRKLTKDDIRELIYREILEYHPEMLQEYAHGAGKISFMYPSGLDGFKHRFADLEENNSRRERSTLLYRKYASLPRERVCAAEEEEEEEEEEEETNRNSLKKENAASVVRASILSPPGSRNGKKMEDARGNSLIMQNNRCKTAYKGHRLVKSASLNNSMWAVVMDPKPGSKF 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5452g00014 501 Coils Coil 407 432 - -
Pral5452g00014 501 SMART serkin_6 16 307 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5452g00014 501 MobiDBLite consensus disorder prediction 409 460 - -
Pral5452g00014 501 Gene3D Phosphorylase Kinase; domain 1 32 353 - -
Pral5452g00014 501 FunFam Mitogen-activated protein kinase 6 110 - -
Pral5452g00014 501 SUPERFAMILY Protein kinase-like (PK-like) 12 312 IPR011009 -
Pral5452g00014 501 Pfam Protein kinase domain 16 307 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5452g00014 501 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 15 357 - -
Pral5452g00014 501 ProSitePatterns MAP kinase signature. 51 154 IPR003527 GO:0004707|GO:0005524|GO:0006468
Pral5452g00014 501 ProSiteProfiles Protein kinase domain profile. 16 307 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5452g00014 501 Gene3D Transferase(Phosphotransferase) domain 1 102 330 - -
Pral5452g00014 501 ProSitePatterns Protein kinases ATP-binding region signature. 22 46 IPR017441 GO:0005524
Pral5452g00014 501 FunFam Mitogen-activated protein kinase 102 330 - -
Pral5452g00014 501 CDD STKc_TDY_MAPK 15 352 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5452g00014 Pral-Chr5452 52341 59366 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5452g00014 2 501 MAP Kinase Gene Family AT3G18040 69.600 0.0 691
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Pral5452g00014 Pkinase 6.3e-67 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5452g00014 - - jre:109002546 729.939