Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5452g00011 ATGCTGGACAAAGATTTCTTCACTGAGTATGGAGAGGCAAGTCGGTATGAAATTCAAGAAGTTGTCGGAAAGGGCAGCTATGGTGTTGTTGCATCTGCAATTGATACATACAGTGGAGACAGGGTTGCTATCAAGAAGATGAACAATGTGTTTGAACATGTCTCTAGTGCCACTCGCATTCTTCGGGAAATAGAGCTCCTTCGGCTGCTCAAACATCCAGATATAGTAGAAATAAAGCACATAATGCTTCCTCCATGTCAAAGAGAATTTGAAGACATTTATGTGGTATTTGAGTTAATGGAATCTGATCTTCATGAAGTTATTGAAGCCAACCATGATCTCACTCCTGGACATTACCAATTCTTCTTGTATCAGCTTCTTCGAGCTCTAAAATACATACATTCAGCGAATGTCTTCCATCGAGACTTGAAACCAAAAAACATTCTGGCTAATGCAGACTGCAAACTAAAGATTTGTGATTTTGGGCTTGCCCGTGCATCATTTGATGAGGCCCCATCTGCTATTTTTTGGACAGATTATGTTGCGACTCGATGGTATCGTGCTCCAGAACTATGTGGCTCTTTTTTCTCCAAGTACACCCCTGCCATAGATATCTGGAGCATAGGATGTATTTTTGCGGAGATGCTAACTGGGGAGCCTTTGTTTCCCGGAAAGAATATACGGAATGAAAAAGCTAGAACATATTTAAATAGCATGGGGAGAAAGCCATCCATTCCTTTATCAGAAAAATTTCCTCATGCAGACCCAATGGCTCTTCGTTTACTTCAGCGCTTGCTTGCGTTCGATCCTACTGAGCGTCCTTCTGCTGAAGAGGCACTTGCCGATCCCTATTTTTATGGTTTGGCAAATTTGGCTGATGAACCATCCATGAAACCAATTTCGAAGTTTGAGTTCGAGTTTGAAAGAAGAAAATTGACTAAAGATGATATAAGAGAACTAATATATAGAGAGATTTTAGAATATCATCCAGAGATGCTGCAGGAGTATGCTCATGGTGCAGGGAAGATTAGCTTTATGTATCCCAGTGGACTTGATGGCTTCAAGCACCGATTTGCTGATCTTGAGGAAAATAATAGCAGAAGGGAAAGAAGCACACTGCTATATAGGAAATATGCCTCATTGCCCAGGGAGCGGGTATGCGCAGCTGAGGAAGAGGAGGAGGAGGAGGAGGAGGAGGAGGAAACGAACAGAAATTCGCTCAAGAAGGAGAATGCAGCTTCTGTTGTGCGTGCAAGCATTCTGAGTCCTCCAGGGTCCCGGAATGGTAAAAAAATGGAAGATGCTCGCGGAAACTCATTAATAATGCAGAACAACCGATGCAAAACAGCTTATAAGGGCCATAGACTTGTAAAGAGTGCTAGTCTGAATAATTCTATGTGGGCAGTTGTCATGGATCCAAAACCAGGAAGTAAATTTTAA 1440 0.4215 MLDKDFFTEYGEASRYEIQEVVGKGSYGVVASAIDTYSGDRVAIKKMNNVFEHVSSATRILREIELLRLLKHPDIVEIKHIMLPPCQREFEDIYVVFELMESDLHEVIEANHDLTPGHYQFFLYQLLRALKYIHSANVFHRDLKPKNILANADCKLKICDFGLARASFDEAPSAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEMLTGEPLFPGKNIRNEKARTYLNSMGRKPSIPLSEKFPHADPMALRLLQRLLAFDPTERPSAEEALADPYFYGLANLADEPSMKPISKFEFEFERRKLTKDDIRELIYREILEYHPEMLQEYAHGAGKISFMYPSGLDGFKHRFADLEENNSRRERSTLLYRKYASLPRERVCAAEEEEEEEEEEEETNRNSLKKENAASVVRASILSPPGSRNGKKMEDARGNSLIMQNNRCKTAYKGHRLVKSASLNNSMWAVVMDPKPGSKF 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5452g00011 479 Gene3D Transferase(Phosphotransferase) domain 1 228 308 - -
Pral5452g00011 479 FunFam Mitogen-activated protein kinase 6 110 - -
Pral5452g00011 479 Gene3D Phosphorylase Kinase; domain 1 309 331 - -
Pral5452g00011 479 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 15 335 - -
Pral5452g00011 479 FunFam Mitogen-activated protein kinase 100 230 - -
Pral5452g00011 479 SMART serkin_6 16 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5452g00011 479 MobiDBLite consensus disorder prediction 388 438 - -
Pral5452g00011 479 SUPERFAMILY Protein kinase-like (PK-like) 12 290 IPR011009 -
Pral5452g00011 479 ProSiteProfiles Protein kinase domain profile. 16 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5452g00011 479 Gene3D Phosphorylase Kinase; domain 1 14 99 - -
Pral5452g00011 479 Pfam Protein kinase domain 16 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5452g00011 479 Gene3D Transferase(Phosphotransferase) domain 1 100 226 - -
Pral5452g00011 479 Coils Coil 385 410 - -
Pral5452g00011 479 ProSitePatterns MAP kinase signature. 51 154 IPR003527 GO:0004707|GO:0005524|GO:0006468
Pral5452g00011 479 ProSitePatterns Protein kinases ATP-binding region signature. 22 46 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5452g00011 Pral-Chr5452 52341 59366 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5452g00011 2 479 MAP Kinase Gene Family AT3G18040 66.400 0.0 647
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Pral5452g00011 Pkinase 1.5e-67 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5452g00011 - - jre:109002546 684.1