Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5452g00004 ATGGAGCCTAATGGCGGCAACAGAGCTGTGCTCTCGCATTGCCTCCAAATAAACATGGAAGAAACTCACAAGGTGGTGGTGCCGCCTCGCCGGACCACCCTCGAGAAGCTGAGTGCCAAGCTGAAAGAAATGTTCTTCCCTGACGACCCTCTTCGCCAATTCAAGGGGCAGCCATTGAAGAACAAGCTGGTCCTTGCAGCCCAGTATTTCTTCCCTATTCTTCAATGGGGTCCCAATTACAACCTTTCTCTCTTGAAATCCGACATCGTTTCTGGCCTCACCATTGCCAGCTTGGCCATCCCGCAGGGAATCAGTTATGCTAAGCTGGCAAGTCTTCCTCCAATTGTTGGGCTCTATTCCAGCTTTGTGCCTCCTCTGGTTTATGCCGTGCTGGGAAGTTCAAGGGACCTTGCGGTAGGGCCTGTGTCCATTGCGTCTCTTGTGCTGGGGTCGATGCTGAGGCAAGAGGTGTCCCCAGCTTCTGACCCTGTTCTGTTTCTGGAGCTAGCTTTCACTTCTACCTTCTTTGCTGGTCTCTTTCAAGCGTCTCTTGGAATCCTAAGGCTAGGCTTCATCATTGACTTCTTATCAAAGGCCATTCTGATTGGGTTCATGGCTGGAGCAGCCATTATTGTGTCTCTGCAACAACTAAAAGGCTTACTGGGAATCACACATTTCACCACCAAGATGGGCCTCATACCTGTGATGACCTCAGTTTTTCACAATACCCATGAGTGGTCCTGGCAAACAATAGTGATGGGTTTTTGCTTCTTGGTGTTACTCCTACTGGCAAGACACGTTAGCATGAGGAAGCCAAAGCTTTTCTGGGTCTCAGCTGGTGCTCCTCTTGTGTCTGTGATAATCTCTACCCTTCTGGTATTTGCAATAAAGGCTCAGCATCATGGCATCAGCGTTATAGGAAAACTGCAAGAAGGTCTAAATCCTCCTTCATGGAATATGCTGCGCTTTAATGGAACTCATCTGGGTCTTGTAATCAAAACTGGGCTTATCACTGGCGTTTTGTCCCTCACTGAAGGTATTGCAGTAGGAAGGACTTTTGCAGCTCTCAAGAGCTACAAAGTGGATGGAAATAAGGAGATGATGGCAATCGGCTTCATGAATGTGGTTGGCTCCTTCACTTCCTGCTATGTCACTACAGGTGCTTTCTCTAGATCAGCTGTCAATAACAATGCGGGAGCAAAAACAGCTGTATCAAATATAGTAATGTCCATGACAGTTATGGTGACACTCCTGTTTCTTATGCCGCTGTTTCAGTACACTCCGAATGTTGTACTGGGAGCAATCATAGTCACAGCAGTAATTGGTCTCATTGATATCCCTGCTGCTTATTACATCTGGAAGTTAGACAAATATGACTTTATTGTAATGCTCACCGCGTTCTTCGGAGTCATTTTTATCTCTGTTCAAGAAGGCCTTGCTCTGGCAGTTGGGTTGTCAATTCTGAAGATCCTCCTGCAAGTTACAAGGCCTAAGACAGTGATGTTGGGCAACATACCCGGTACAGATATATATCGAAATGTTGATCATTATGAGGAAGCTGTGAAGTTGCCTGGTCTTCTCATTTTAAGCATCGAGGCTCCCATCAATTTCGCAAACATCACATATCTCAACGAGAGGATCTTACGATGGATCGAAGAATATGAAGAGGAAGATAACATCAAGAAAAGCTCAAGGCTTCAATATGTGATTCTGGAAATGTCAGCTGTGAGCAGCGTAGACACAAGTGGAGTCTCACTTTTCAGAGAACTGAAACAAGCAATGAAAAATAAGGGCGTTGAGATTGTGCTCGTGAATCCTCTGGCTGAGGTTATGGAGAAGTTGAAAAAAGCAGACGAAGGCAATGACTTGATGAGAGCAGACAACCTTTTCTTAACAGTTGGGGAGGCTGTGGCTTCGCTTTCATCTGTGACGAAGGGCCAAGCATCAAATATGGAAGAAGGGGCACAAGAAATTCCTCACTTCTGA 1986 0.4612 MEPNGGNRAVLSHCLQINMEETHKVVVPPRRTTLEKLSAKLKEMFFPDDPLRQFKGQPLKNKLVLAAQYFFPILQWGPNYNLSLLKSDIVSGLTIASLAIPQGISYAKLASLPPIVGLYSSFVPPLVYAVLGSSRDLAVGPVSIASLVLGSMLRQEVSPASDPVLFLELAFTSTFFAGLFQASLGILRLGFIIDFLSKAILIGFMAGAAIIVSLQQLKGLLGITHFTTKMGLIPVMTSVFHNTHEWSWQTIVMGFCFLVLLLLARHVSMRKPKLFWVSAGAPLVSVIISTLLVFAIKAQHHGISVIGKLQEGLNPPSWNMLRFNGTHLGLVIKTGLITGVLSLTEGIAVGRTFAALKSYKVDGNKEMMAIGFMNVVGSFTSCYVTTGAFSRSAVNNNAGAKTAVSNIVMSMTVMVTLLFLMPLFQYTPNVVLGAIIVTAVIGLIDIPAAYYIWKLDKYDFIVMLTAFFGVIFISVQEGLALAVGLSILKILLQVTRPKTVMLGNIPGTDIYRNVDHYEEAVKLPGLLILSIEAPINFANITYLNERILRWIEEYEEEDNIKKSSRLQYVILEMSAVSSVDTSGVSLFRELKQAMKNKGVEIVLVNPLAEVMEKLKKADEGNDLMRADNLFLTVGEAVASLSSVTKGQASNMEEGAQEIPHF 661
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5452g00004 661 ProSiteProfiles STAS domain profile. 516 640 IPR002645 -
Pral5452g00004 661 Pfam STAS domain 517 636 IPR002645 -
Pral5452g00004 661 FunFam Sulfate transporter 31 496 643 - -
Pral5452g00004 661 NCBIfam sulfate permease 72 635 IPR001902 GO:0016020|GO:0055085
Pral5452g00004 661 SUPERFAMILY SpoIIaa-like 521 640 IPR036513 -
Pral5452g00004 661 CDD STAS_SulP_like_sulfate_transporter 517 633 - -
Pral5452g00004 661 PANTHER SULFATE TRANSPORTER 34 641 IPR001902 GO:0016020|GO:0055085
Pral5452g00004 661 Gene3D STAS domain 496 642 IPR036513 -
Pral5452g00004 661 ProSitePatterns SLC26A transporters signature. 114 135 IPR018045 GO:0008271|GO:0008272
Pral5452g00004 661 Pfam Sulfate permease family 85 465 IPR011547 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5452g00004 Pral-Chr5452 27845 33655 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5452g00004 21 648 Inorganic Solute Cotransporters AT3G15990 65.714 0.0 847
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5452g00004 K17471 - gmx:100787284 1078.16