Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5451g00004 ATGTATATCAGGCAACGTCAGCTTCTTTACTACAGAGACGAGTTCGGCGACAGGGGAGAACACGTCACTGTCGATCCTTCTCTGGTTTTCGAGAACAATCGCATAAAAAATGCTTATATGGCTTTACAAGCTTGGAAGCAAGCCATTCTTTCCGATCCGAACAATTGTACGCTCAATTTTGGAGCAAATGTCTGTGACTATAGCAACGTTTTCTGTGCTCCGGCGATTGACAACCCGAAGGTTCGTACTGTTGCTGGCATTGATCTCAACCACTGCGACATTGCTGGGTACTTGCCGGAAGAGCTTGGACTACTCGCGGATCTTGCTCTCCTCCACATCAACACCAACAGGTTCTGTGGTACTGTTCCTCACAAGTTTGATAGACTGAAGCTCCTGTTTGAACTGGATCTCAGCAACAATAGGTTCGCTGGGAAGTTCCCCACGGTGGTTCTGAGGCTTCCCGCTCTCAAGTTCTTGGATCTGAGATTCAATGAATTTGAAGGGACAGTGCCTAGAGAGCTTTTTGATAAGGATCTGGACGCTATCTTTATAAACAACAATCGGTTTGTGTTCGATCTTCCCGACAATTTCGGCAACTCTCCGGTGTCGGTCATTGTCGTAGCCAACAACAAGTTCCATGGCTGTCTCCCAGCGAGCTTGGGCAACATGACAAACCTTAATGAGATCATTCTGTTGAATAATGCCCTCCGTTCATGCTTGCCTTCAGAGATTGGGTTACTGAAGAACTTGACAGTGTTCGATGTGAGCTTCAATCAGCTCTTGGGTCCCTTGCCAGATACCATCGGAGGCATGGTGAGCCTTGAGCAGTTGAATGTAGCTCACAATTTGCTTTCTGGGAAAATTCCAGGGAGCATTTGTATGCTGCCAAACCTGCAGAACTTCACATATTCATATAACTTCTTCACTGGTGAGCCCCCGTCGTGCCTCAGTTTGCCGTCGTTCGATGATCGGAGAAACTGCTTGCCGGCGAGGCCATTACAGAGGTCAGCCGCACAATGCAAAGCTTTCTTATCAAGGCCTGTTGACTGTAACTCGTTTAAATGTAAGCCATTTGTTCCATCGGTTCCTCCGCCTCCCAACCCTTCCCCTCCGATACCGGTACCTTCCCCACCACCCGTTGTCGTCCCTTCACCTCCTCCCTCACCAGTATTTGTTCCACACTCTCCGCCTCCACCTTCCCCGCCACCTCCAGTATATTCGCCCCCACCGCCTCCTCCGTCGCCACCTCCGCCAGTCTACTCACCACCACCTCCTCCGCCAGTCTACTCTCCACCACCTCCTCCGCCTTCACCACCCCCACCGTCACCTCCCCCACCTTCCCCTCCGCCAGTCTATTCTCCACCGCCGCCGCCACCGTCACCTCCACCTCCCTCACCACCCCCGCCAGTCTATTCACCACCACCACCACCACCGTCCCCGCCGCCACCTTCACCTCCACCTCCTTCTCCATCCCGCCACCACCTTCACCTCCCCCCATCTCCTCCACCACCTTCACCTACTCCAACGCCACCATACTGCGTCCGTTCTCCACCGCCACCGCCACCAAATTCACCACCACCACCACCACCGTCTCCTGTATTCTACCCTCCACCGACATACAGCTCGCCTCCGCCACCTCATCACTCACCTCCGCCACCTCCCCACTCTCCTCCACCTCCTCCTCACTCACCTCCGCCGCCTATTTATCCCTATTTATCACCACCACCACCTCCTCCAGTCTATTCTCCTCCTCCCCCTGTCCATTCACCACCCCCACCATCTCCCCCACCGTGTATAGAACCACCACCACCTCCACCACCTTGTGAAGAGCATCAACCGCCGCCACCTTCCCCCACACCTTATTTACCACCTCCCTCCCCATCTCCCCCTCCGCCACCAGCTCCTGTTCACTACAGTTCTCCACCGCCGCCACCTGTTCAGTACAATTCGCCGCCGCCGCCCCCGCCCGCAGTTCACTATGGTTCTCCCCCACCACCAGTGTACCATTCTCCTCCACCGCCATCACCGCCTCCCTGTGAAGAATCTCCGCCTGCCCCGTCCCCACCTCCACCGGTCACGTACGGAAACCCTCCACCTGCTCCTGTATATGAAGGGCCTTTGCCACCTGTCTTCGGAGTCTCTTACGCATCTCCACCTCCACCACCCTTCTATTGA 2175 0.5485 MYIRQRQLLYYRDEFGDRGEHVTVDPSLVFENNRIKNAYMALQAWKQAILSDPNNCTLNWXGANVCDYSNVFCAPAIDNPKVRTVAGIDLNHCDIAGYLPEELGLLADLALLHINTNRFCGTVPHKFDRLKLLFELDLSNNRFAGKFPTVVLRLPALKFLDLRFNEFEGTVPRELFDKDLDAIFINNNRFVFDLPDNFGNSPVSVIVVANNKFHGCLPASLGNMTNLNEIILLNNALRSCLPSEIGLLKNLTVFDVSFNQLLGPLPDTIGGMVSLEQLNVAHNLLSGKIPGSICMLPNLQNFTYSYNFFTGEPPSCLSLPSFDDRRNCLPARPLQRSAAQCKAFLSRPVDCNSFKCKPFVPSVPPPPNPSPPIPVPSPPPVVVPSPPPSPVFVPHSPPPPSPPPPVYSPPPPPPSPPPPVYSPPPPPPVYSPPPPPPSPPPPSPPPPSPPPVYSPPPPPPSPPPPSPPPPVYSPPPPPPSPPPPSPPPPSPSRHHLHLPPSPPPPSPTPTPPYCVRSPPPPPPNSPPPPPPSPVFYPPPTYSSPPPPHHSPPPPPHSPPPPPHSPPPPIYPYLSPPPPPPVYSPPPPVHSPPPPSPPPCIEPPPPPPPCEEHQPPPPSPTPYLPPPSPSPPPPPAPVHYSSPPPPPVQYNSPPPPPPAVHYGSPPPPVYHSPPPPSPPPCEESPPAPSPPPPVTYGNPPPAPVYEGPLPPVFGVSYASPPPPPFY 725
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5451g00004 725 Gene3D Ribonuclease Inhibitor 39 200 IPR032675 -
Pral5451g00004 725 FunFam Leucine-rich repeat extensin-like protein 5 201 340 - -
Pral5451g00004 725 PRINTS Proline rich extensin signature 407 432 - -
Pral5451g00004 725 PRINTS Proline rich extensin signature 365 381 - -
Pral5451g00004 725 PRINTS Proline rich extensin signature 387 404 - -
Pral5451g00004 725 FunFam Leucine-rich repeat extensin-like protein 1 39 200 - -
Pral5451g00004 725 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 22 505 - -
Pral5451g00004 725 Gene3D Ribonuclease Inhibitor 201 329 IPR032675 -
Pral5451g00004 725 MobiDBLite consensus disorder prediction 367 725 - -
Pral5451g00004 725 SUPERFAMILY L domain-like 40 322 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5451g00004 Pral-Chr5451 28879 31903 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5451g00004 2 428 Leucine-rich Repeat extension Gene Families AT3G24480 70.794 0.0 603
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5451g00004 - - qsa:O6P43_007947 624.394