Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5451g00001 ATGGCAAATCGACTGAAGGAAGATGAGAAGAATGAGCGAATAATTCGAGGTCTTCTCAAACTTCCAGCGAACCGAAGATGTATTAATTGCGACAGTCTGGGGCCACAATATGTGTGCACAAATTTCATGACGTTTGTTTGCACAACCTGTGGTGGGATACACCGGGAATTTACGCATAGAGTCAAGTCAATATCGATGGCCAAGTTCACTTCACAAGAAGTTAGTGCACTTCAGGAAGGAGGAAATCAGCATGCAAAGGAAGTTTATTTTAAAGAATGGGACCCAAAAAGCCATTCTCTCCCTGATAACAGTGATGTTGCCAGGCTCCGCAACTTTATTAAACAAGTTTACGTGGATAAAAGATTCACTAGTGAGAGGACCTATGACAAATCACAGAGAGTAAATACAGGCGACAAGGATAATTTCTCAGTAAACTCGAGAGTTCAATCATATCAGGGTGGTCCTAAAAGTCCACCATATGATGACAAATATAAACACCGATATAGTGACAGCTCTAGTCCGGGTGGAAGAAGTCCTGGGTATGATCAAGAAAGTAGGCAGTACAGTAATGATAAGAGAAATCCTAGTCATCCTCCGATCAATTATTGGCATCAAGAAGATAGATTTGGAGATGGAAGGAGGTTTGAAGGTCGTATGGTATCTGATGGAGATTATAAGCTGGAAGGCCAATTGCCTGGGCAAGCCAACAACCCGGATTCCTCAAGCCCACCCGTGGTTCGGTCTGTTAGAGATATTTTGGGAGAAAATGCAGCGTCTCTTCAAATAAGTAAACCCTCTGAAACGAATAGTAAAAAAGCTAATGATGGCTCAGCTCTCACACAGAGTACTGTATGTTCCAGTAGCTTGACATCCAACATTGGAAACCCTGCAGAAGCTAAGCTTGAGACCCCTAAGAGTCTTATTGATTTTGGTGCTGAGCCTGAGCCTCCTCTGGCTCCAGCAATTACACACGCCCAACAAACTACTGCCCAATCCATTGTGGAGCAACCAAATTCCAGTGATGTCAACAATTGGGCCTCTTTTGATGTGCCCCTAGAAGTGAAAGCAACTCAAACTCCTTCAAATGTAAATACACTAGAATCCATGCTTTCCCAATTGTCAGTATCATCATCATCACCACCAGCTCATGCTTCTCAAGTCCAGCATGGTTCCAGTGTTGTAATACCCATTCCTGGGAGCACTATGACATTACAAAGAACTGGGAACTTATCTGTTTCAACTGCTGGGCCTGCACCAGCACCATCTCTTACTGCTACTGTTGTTGGAGCTGCACCTATCAGCACCTTTGCGCCTATTCCATCCAATAGTGCTTTAGCGTCACACCATCTGCAGCCTTTGTTCCCTCCCAATGTTGGTCAGTCTTCAAATTATCAGTCTACACCACCACCAGCAGGAGCATTAAATAATCAGCCATGGGGTATACGTCCAACACCAACAATGCAAGGCGATCCAAACATGTCACTGCCACATGTGTCCTATGTTATCTCTAAGCCTGCCACTGAGACTAGCTCTAATGTGGCTTCAGGATCGTCTTTAGAAGTAAAACCAAGTGGAAGGAAAGAACTTCCTGAGGATCTTTTTACTGTAAAGTATTCTTACTTTCCTGCTGCAGTTTCGGGGTGGCAAATGGTTCCTTCTCATGGGATGGGAACCTCAATGCCATATAATGCTGTGCCCATGCCAAGTCTTCAGCGACCATCAAAATCAATAAATCCATTTGATATTGGCGAACCACCAGTTCAAACCACAGCTTTTGCTTTGAGATCATCCTTGCAAGGTGCTCTGCCAAGGGTATCAACTTCAGGTTTAATGCCTCCTTCAAGCCTGAGTAATCCATCACTTGCGTGGAATCCACCTGGGTACGGATTCATGCCACCCCAACAAATGCAGCCTCATCCATCAGCAATGACAACAAGTAAATTAATCTATCTATCACTCTTCTGTAAATTATTTCATGATTCATGCTGA 1989 0.4389 MANRLKEDEKNERIIRGLLKLPANRRCINCDSLGPQYVCTNFMTFVCTTCGGIHREFTHRVKSISMAKFTSQEVSALQEGGNQHAKEVYFKEWDPKSHSLPDNSDVARLRNFIKQVYVDKRFTSERTYDKSQRVNTGDKDNFSVNSRVQSYQGGPKSPPYDDKYKHRYSDSSSPGGRSPGYDQESRQYSNDKRNPSHPPINYWHQEDRFGDGRRFEGRMVSDGDYKLEGQLPGQANNPDSSSPPVVRSVRDILGENAASLQISKPSETNSKKANDGSALTQSTVCSSSLTSNIGNPAEAKLETPKSLIDFGAEPEPPLAPAITHAQQTTAQSIVEQPNSSDVNNWASFDVPLEVKATQTPSNVNTLESMLSQLSVSSSSPPAHASQVQHGSSVVIPIPGSTMTLQRTGNLSVSTAGPAPAPSLTATVVGAAPISTFAPIPSNSALASHHLQPLFPPNVGQSSNYQSTPPPAGALNNQPWGIRPTPTMQGDPNMSLPHVSYVISKPATETSSNVASGSSLEVKPSGRKELPEDLFTVKYSYFPAAVSGWQMVPSHGMGTSMPYNAVPMPSLQRPSKSINPFDIGEPPVQTTAFALRSSLQGALPRVSTSGLMPPSSLSNPSLAWNPPGYGFMPPQQMQPHPSAMTTSKLIYLSLFCKLFHDSC 662
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5451g00001 662 MobiDBLite consensus disorder prediction 258 279 - -
Pral5451g00001 662 CDD ArfGap_AGFG 12 124 - -
Pral5451g00001 662 MobiDBLite consensus disorder prediction 127 208 - -
Pral5451g00001 662 Gene3D Arf GTPase activating protein 1 135 IPR038508 -
Pral5451g00001 662 PANTHER ARFGAP/RECO-RELATED 1 645 IPR044820 GO:0005096
Pral5451g00001 662 PRINTS HIV Rev interacting protein signature 61 82 IPR001164 GO:0005096
Pral5451g00001 662 PRINTS HIV Rev interacting protein signature 24 43 IPR001164 GO:0005096
Pral5451g00001 662 PRINTS HIV Rev interacting protein signature 43 60 IPR001164 GO:0005096
Pral5451g00001 662 SMART arf_gap_3 12 130 IPR001164 GO:0005096
Pral5451g00001 662 Pfam Putative GTPase activating protein for Arf 13 125 IPR001164 GO:0005096
Pral5451g00001 662 FunFam Arf-GAP domain and FG repeat-containing protein 1 1 135 - -
Pral5451g00001 662 MobiDBLite consensus disorder prediction 259 279 - -
Pral5451g00001 662 MobiDBLite consensus disorder prediction 137 153 - -
Pral5451g00001 662 ProSiteProfiles ARF GTPase-activating proteins domain profile. 12 130 IPR001164 GO:0005096
Pral5451g00001 662 SUPERFAMILY ArfGap/RecO-like zinc finger 11 124 IPR037278 -
Pral5451g00001 662 MobiDBLite consensus disorder prediction 171 185 - -
Pral5451g00001 662 MobiDBLite consensus disorder prediction 224 246 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5451g00001 Pral-Chr5451 1412 7327 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5451g00001 12 122 C2H2 Transcription Factor Family AT4G05330 34.188 1.86e-11 64.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5451g00001 - - pcin:129292898 945.651