Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5450g00090 ATGGCAGTCTCTCCTCTCCCCATTGCCACTGCAAGTCCCACTGTTCTTCAAATCTCTGCTACTCCCAAATTCACTCTCTCTTGTTCTCTTTCTTGTCATCCAAAAACCACTAGTTCCAGGCCCAAGCTTTCTTCATCCTCCATTCCTGCAACTAGGAAAACATTCCTGAACATTGGTATTGGCCTTGTAGCAGCCTCAGTCCTGGCCTTGACGCCCTTGGATGCCGATGCAACTAGAATTGAATATTACGCCACTGTGGGGGAACCTTTATGTGAACTTAACTATGCGAAGTCTGGTCTCGGTTACTGCGACATTGTAGAAGGACCTGGGGACGAAGCCCCCCTCGGCGAGCTTATTAATGTTCACTACACTGCAAGATTCGCTGATGAGACTGTGTTTGATAGCAGCTACAAACGGGCTAGGCCTCTCACCATGCGCATAGGTGTCGGTAAGGTTATCAAGGGATTGGATCAGGGAATTTTGGGGGGTGAAGGAGTACCCCCAATGCGGATAGGTGGGAAACGCAAACTAAGGATTCCTCCACATTTAGCATACGGCCCAGAACCTGCGGGCTGCTTTTCAGGTTTGACTAAACTAGGCATCGTTCTACAAGATAAGAGATATTAA 627 0.4833 MAVSPLPIATASPTVLQISATPKFTLSCSLSCHPKTTSSRPKLSSSSIPATRKTFLNIGIGLVAASVLALTPLDADATRIEYYATVGEPLCELNYAKSGLGYCDIVEGPGDEAPLGELINVHYTARFADETVFDSSYKRARPLTMRIGVGKVIKGLDQGILGGEGVPPMRIGGKRKLRIPPHLAYGPEPAGCFSGLTKLGIVLQDKRY 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5450g00090 208 FunFam Peptidylprolyl isomerase 88 203 - -
Pral5450g00090 208 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 113 190 IPR001179 GO:0003755
Pral5450g00090 208 Gene3D - 89 200 IPR046357 GO:0003755
Pral5450g00090 208 PANTHER PHOTOSYNTHETIC NDH SUBUNIT OF LUMENAL LOCATION 4, CHLOROPLASTIC 1 195 IPR044183 GO:0009507
Pral5450g00090 208 SUPERFAMILY FKBP-like 95 192 - -
Pral5450g00090 208 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 116 208 IPR001179 GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5450g00090 Pral-Chr5450 389227 391934 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5450g00090 97 186 Calmodulin-binding Proteins AT3G25230 41.758 3.94e-11 59.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5450g00090 K01802 - csv:101213042 270.396