Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5450g00089 ATGGCAGTCTCTCCTCTCCCCATTGCCACTGCAAGTCCCACTGTTCTTCAAATCTCTGCTACTCCCAAATTCACTCTCTCTTGTTCTCTTTCTTGTCATCCAAAAACCACTAGTTCCAGGCCCAAGCTTTCTTCATCCTCCATTCCTGCAACTAGGAAAACATTCCTGAACATTGGTATTGGCCTTGTAGCAGCCTCAGTCCTGGCCTTGACGCCCTTGGATGCCGATGCAACTAGAATTGAATATTACGCCACTGTGGGGGAACCTTTATGTGAACTTAACTATGCGAAGTCTGGTCTCGGTTACTGCGACATTGTAGAAGGACCTGGGGACGAAGCCCCCCTCGGCGAGCTTATTAATGTTCACTACACTGCAAGATTCGCTGATGAGACTGTGTTTGATAGCAGCTACAAACGGGCTAGGCCTCTCACCATGCGCATAGGTGTCGGTAAGGTTATCAAGGGATTGGATCAGGGAATTTTGGGGGGTGAAGGAGTACCCCCAATGCGGATAGGTGGGAAACGCAAACTAAGGATTCCTCCACATTTAGCATACGGCCCAGAACCTGCGGGCTGCTTTTCAGTAAGGGGATAG 594 0.4949 MAVSPLPIATASPTVLQISATPKFTLSCSLSCHPKTTSSRPKLSSSSIPATRKTFLNIGIGLVAASVLALTPLDADATRIEYYATVGEPLCELNYAKSGLGYCDIVEGPGDEAPLGELINVHYTARFADETVFDSSYKRARPLTMRIGVGKVIKGLDQGILGGEGVPPMRIGGKRKLRIPPHLAYGPEPAGCFSVRG 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5450g00089 197 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 116 197 IPR001179 GO:0003755
Pral5450g00089 197 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 113 189 IPR001179 GO:0003755
Pral5450g00089 197 FunFam Peptidylprolyl isomerase 88 197 - -
Pral5450g00089 197 SUPERFAMILY FKBP-like 95 192 - -
Pral5450g00089 197 PANTHER PHOTOSYNTHETIC NDH SUBUNIT OF LUMENAL LOCATION 4, CHLOROPLASTIC 1 194 IPR044183 GO:0009507
Pral5450g00089 197 Gene3D - 89 196 IPR046357 GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5450g00089 Pral-Chr5450 389227 391934 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5450g00089 97 186 Calmodulin-binding Proteins AT3G25230 41.758 2.64e-11 60.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5450g00089 K01802 - csv:101213042 268.085