Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5450g00079 ATGGGTTCTTCGGCCCAAATAGAGGACGTCGTTGTGGTGGACATTGAGAAGAAGGCTGAGGAACCTAATGAATGGTCTGAGTGGGTGCTCAATGCTCCTGAGCCTCCCAGTCTGTGGCATGAACTTGCAGGCTCAGTGAGCAACACCATTTCACGGTATCAAGGAAAGGCGTCTGGTCCCAGAAGCCAATCCGGACCCAAAATTATGGTTTCATTCCTGCAAGCCATGTTTCCTGTTCTTGGCTGGGGTCGAAACTATTCAGCCATAAGCTTCAGGAATGATTTACTCGCAGGTCTCACTATTGCAAGTCTCTGCATTCCGCAGGGCATTGGGTATGCAACTTTAGCGAGGCTGGATCCTGAATATGGCCTCTATACCAGTGCGGTGCCGCCTCTTATCTATGCAATGATGGGAAGTTCAAGGGAGGTGGCAATTGGACCGGTGGCCGTGGTTTCATTGTTGTTGTCGTCAATGATTCAGAAACTAATAGACCCTTCCACTGATCCTTTGGGTTACACAAAGCTGGTTCTGACTGCCACTTTATTTGCCGGCATATTCCAGGCTGCCTTCGGACTCTTGAGGTTGGGGTTCTTGCTGGAATTTCTGTCGCATGCTGCTATAGTAGGATTCACAGCGGGAGCGGCCATTGTTATTGGACTTCAACAGCTGAAGGGCCTTTTTGGGTTCCAACGCTTTACCAACAAAACCGACGTCGTCTCTGTCACCATGTCTGTTCGCGAATCTCTTGATCATCCTCTGCAGTGGAATTACCTCAATGTTGTGCTGGGATGCTCGTTCCTCATTTTGATGCTCATATCCAGATTTCTGGGTAAAAGGAACAGAAAACTATTTTGGCTGCCAGCAATCTCCCCTCTCGCATCGGTTGTGCTATCAACCCTCATTGTTTTTCTCACCCGAGCTGATAAACATGGAGTTAATATTGTGAAACACGTAAAAGGAGGGCTGAATCCAAGTTCCGTTCATCTTTTAGAGCTGAACAGCCCCTATATTGGAGAAGTCGCCAAAATCGGACTGGTTGCTTCTGTTATTGCACTCACTGAATCGGTTTCAGTCGGCCGATCTTTTGCTTCCATGAGAGGATACCACATTGATGGAAACAAAGAAATGGTGTCCATCGGATTCATGAACATTATAGGGTCTTTCACATCATGCTACGTTGCAACTGGTTCGTTTTCGCGCACGGCGGTGAATGTGGCGGCGGGATGTGAAACTGCAGGGTCAAACATCGTGATGGCTATTACGGTGGTTATCTCGTTGCTATGCTTCACGAAGCTCTTATATTTCACTCCAACGGCGATTCTTGCCTCAATCATCATTTCTGCTCTCCCAGGACTCGTAGACTTCAATGAGGCTTACAGAATATGGAAGCTTGATAAGCTTGATTTTCTTGCTTGCGCCGGAGCCTTCTTTGGGGTCCTCTTCTCTTCCGTCGAGATTGGCCTCCTGGTGGCCGTGGCGATATCCTTTACAAATATAATAATGATCTCAATTCGACCCGGCACAGAAACTCTCGGAAGACTCCCTGAAACAGACTGGTTCTGCGATGTCCATCAGTATCCTATGGCTGTTAAGACTGCTGGAGTCTTAATAATACGTGTCAAGTCTGCCTTGCTTTGCTTTGCTAATGCCAACTTCGTTACAGAAAGGATCATGAAACTGATCACAGACGAAGAAGAAGAAGAAGAAGCCAATGAGAACGAGGGAGACACCAAAAGGACAATTCAGCTCGTAATCATCGACGCCTCCAATTTAATGAACATCGACACGTCAGGAATTGCTTCTCTAGAGGAACTACACAAGAGTTTGGTTTCACATGGGAAACAGGGAGTCTCTCAGTTAGCAATCGCCAACCCCAGGTGGCAAGTGATTCACAAGCTGAAGGCTGCTAACTTCGTCAGAACAATCGGTGGAAGGGTCTTCTTGACTGTTGCGGAAGCTGTCGGGTGTAAACTGGATCCAGTCTAA 1986 0.4743 MGSSAQIEDVVVVDIEKKAEEPNEWSEWVLNAPEPPSLWHELAGSVSNTISRYQGKASGPRSQSGPKIMVSFLQAMFPVLGWGRNYSAISFRNDLLAGLTIASLCIPQGIGYATLARLDPEYGLYTSAVPPLIYAMMGSSREVAIGPVAVVSLLLSSMIQKLIDPSTDPLGYTKLVLTATLFAGIFQAAFGLLRLGFLLEFLSHAAIVGFTAGAAIVIGLQQLKGLFGFQRFTNKTDVVSVTMSVRESLDHPLQWNYLNVVLGCSFLILMLISRFLGKRNRKLFWLPAISPLASVVLSTLIVFLTRADKHGVNIVKHVKGGLNPSSVHLLELNSPYIGEVAKIGLVASVIALTESVSVGRSFASMRGYHIDGNKEMVSIGFMNIIGSFTSCYVATGSFSRTAVNVAAGCETAGSNIVMAITVVISLLCFTKLLYFTPTAILASIIISALPGLVDFNEAYRIWKLDKLDFLACAGAFFGVLFSSVEIGLLVAVAISFTNIIMISIRPGTETLGRLPETDWFCDVHQYPMAVKTAGVLIIRVKSALLCFANANFVTERIMKLITDEEEEEEANENEGDTKRTIQLVIIDASNLMNIDTSGIASLEELHKSLVSHGKQGVSQLAIANPRWQVIHKLKAANFVRTIGGRVFLTVAEAVGCKLDPV 661
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5450g00079 661 ProSiteProfiles STAS domain profile. 545 657 IPR002645 -
Pral5450g00079 661 CDD STAS_SulP_like_sulfate_transporter 526 648 - -
Pral5450g00079 661 PANTHER SULFATE TRANSPORTER 67 655 IPR001902 GO:0016020|GO:0055085
Pral5450g00079 661 Pfam STAS domain 526 653 IPR002645 -
Pral5450g00079 661 NCBIfam sulfate permease 78 650 IPR001902 GO:0016020|GO:0055085
Pral5450g00079 661 Gene3D STAS domain 505 657 IPR036513 -
Pral5450g00079 661 ProSitePatterns SLC26A transporters signature. 120 141 IPR018045 GO:0008271|GO:0008272
Pral5450g00079 661 Pfam Sulfate permease family 91 473 IPR011547 GO:0016020
Pral5450g00079 661 SUPERFAMILY SpoIIaa-like 532 654 IPR036513 -
Pral5450g00079 661 FunFam Sulfate transporter 31 505 659 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5450g00079 Pral-Chr5450 370703 375641 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5450g00079 20 654 Inorganic Solute Cotransporters AT5G10180 64.882 0.0 841
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5450g00079 K17469 - gmx:100775538 910.212