Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5450g00071 ATGGCGGCAACTATAGGTATGTATAATAATAATAGCAGCAGCGTGGCGTCAGATTTCTTAGACCCGCGTAGTGAAGATCTGATGAAGGCCCTTGAACCTTTTATCAAAATGGATTCATCAGCGTCTTCTCTGTCTTCTGTTTCTTTTCTGTCTTCACCTTTCTGCTCTCATACCCCGCCCACTCCTATGTCCAGTTATCATCCCAACCTCCGCACAGCATCGAGCTCCCACATATTTTCTGCGGGGTTCTCGAGTGGCATAGGGCTAAACCAACTCACCCCATCTCAAATTCTTCAGATTCAGGCTCAATTCCAGGCCCGACAACAACAGTCCCTGGGCCTCCTCAGCCCCAAACCTGTCCCCATGAAACACGTCCGTACTGCTCCGAAACCCGCGAAACTATACCGTGGAGTGAGGCAGAGGCATTGGGGGAAATGGGTGGCTGAGATCAGACTCCCAAGGAATCGAACCCGGCTCTGGCTCGGCACTTTTGACACTGCCGAAGAGGCCGCCTTGGCTTATGACAACGCTGCTTATAAGCTTAGGGGTGACTTTGCTCGCCTCAACTTCCCTCATCTGCGACACCAAGGAGCTCACGTGTTTGGGGAGTTTGGGAATTACAAACCTCTTCATTCCTCCGTCGATGCCAAGCTTCAAGCTATTTGTGAGAGTTTGGCCAATTCCCAGAAGCAGGGGAGTGCAGGGGAGCCTTGCTCCGTCGGCGATTCAAAGCCCAAGGTGGCGTCGGACGAGTCAGAATCGAAAAGTGATGCGGAGGGTTGTAAGGTGGAGAACACAGCATCGTCGCCCTTGTCTGATCAATCCTGGGCTGGCTCGTCTTCCCCTGAATCCGACATCACTTTCTTGGATTTCTCGGATTCCAAGGATGACACCATCGACTTCGGCCTGGAGAAGTTTCCTTCCGTGGAGATTGATTGGTCTGCTATTTGA 951 0.5184 MAATIGMYNNNSSSVASDFLDPRSEDLMKALEPFIKMDSSASSLSSVSFLSSPFCSHTPPTPMSSYHPNLRTASSSHIFSAGFSSGIGLNQLTPSQILQIQAQFQARQQQSLGLLSPKPVPMKHVRTAPKPAKLYRGVRQRHWGKWVAEIRLPRNRTRLWLGTFDTAEEAALAYDNAAYKLRGDFARLNFPHLRHQGAHVFGEFGNYKPLHSSVDAKLQAICESLANSQKQGSAGEPCSVGDSKPKVASDESESKSDAEGCKVENTASSPLSDQSWAGSSSPESDITFLDFSDSKDDTIDFGLEKFPSVEIDWSAI 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5450g00071 316 ProSiteProfiles AP2/ERF domain profile. 134 191 IPR001471 GO:0003700|GO:0006355
Pral5450g00071 316 MobiDBLite consensus disorder prediction 246 260 - -
Pral5450g00071 316 Gene3D AP2/ERF domain 134 192 IPR036955 GO:0003700|GO:0006355
Pral5450g00071 316 PRINTS Ethylene responsive element binding protein signature 157 173 IPR001471 GO:0003700|GO:0006355
Pral5450g00071 316 PRINTS Ethylene responsive element binding protein signature 135 146 IPR001471 GO:0003700|GO:0006355
Pral5450g00071 316 FunFam Ethylene-responsive transcription factor 2 133 192 - -
Pral5450g00071 316 MobiDBLite consensus disorder prediction 261 288 - -
Pral5450g00071 316 CDD AP2 133 193 IPR001471 GO:0003700|GO:0006355
Pral5450g00071 316 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF061 9 316 - -
Pral5450g00071 316 SMART rav1_2 134 197 IPR001471 GO:0003700|GO:0006355
Pral5450g00071 316 Pfam AP2 domain 135 183 IPR001471 GO:0003700|GO:0006355
Pral5450g00071 316 MobiDBLite consensus disorder prediction 230 289 - -
Pral5450g00071 316 SUPERFAMILY DNA-binding domain 134 192 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5450g00071 Pral-Chr5450 331318 333011 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5450g00071 3 316 AP2-EREBP Transcription Factor Family AT4G39780 51.250 2.15e-86 259
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Pral5450g00071 AP2 4.5e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5450g00071 K09286 - cave:132166068 347.051