Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5450g00070 ATGACGCAGCAGAATGTGATGGTTTCGGATGCGAACCCCGGGCTCAACATGGCTATTTCTGCCTCTGTTTCAAACTCCTCCATTTTCACGGCCACGGCACACAAACCGCCCTCCGCGCCCTCCGCCTATATTTCCATTCCCCGGAGGAAGGTGCTCAAGAACCTCGAAATCAATGCTTGGGTTGACTCCATGAGAGCCTCTTCTCCCACCCATGCCAAATCCACTCCTTCTCTCACTGAAGAACATAGCTCTTGGATTCTTCACCACCCCTCTGCATTAGACATGTTTGAGCAAATCATCGATGCCTCCAAAGGCAAGCAGATCGTTATGTTCCTGGATTACGATGGCACGCTCTCGCCCATCGTTAACGACCCCGACCGTGCTTTCATGTCCGATGAAATGAGAAAAGCAGTAAGAAAACTCGCGAGGTGTTTTCCCACTGCCATAGTAAGCGGCAGATGCAGAGACAAGGTATACAGCTTTGTTCGCCTGGCGGAGCTATATTATGCGGGAAGCCATGGCATGGATATCAGAGGCCCAACAAGATGCTCCAAATACAATAAAGAAAGCAAAGCAGAGGCAATTCTTTTTCAGCCTGCCAGTGAGTTTCTTCCCATGATAGATGAGGTGTACCAAGCGTTAGTTGAGAAAACCAAATCAACACCAGGAGCGACGGTGGAGAACAACAAGTTCTGCGTCTCTGTTCATTATCGGTGTGTTGATGAGAAGAAATGGAGTGAACTGGCTCACCAAGTGAAATCGGTGCTTAAGGAGTACCCCAAGCTTCGTCTAACCCAAGGAAGGAAGGTTTTTGAGATTCGTCCCGCTATTAAATGGGACAAAGGGAAAGCCCTAGAATTTCTGCTAGAGTCACTTGGATTTGCCAATTGCGCTGATGTCTTCCCTGTCTACATTGGTGATGATCGAACCGACGAAGATGCCTTTAAGAAATTGAGAGAGAGGGGACAAGGTTTAGGCATTCTTGTGTCAAAATTTCCGAGGGACACAAGTGCATCCTACTCTTTGCAGGAACCCGAGGAGGTGAAGGACTTTCTTCAACGTTTGGTTGAGTGGAAGCAAGCATCTCAGCGTACATGCTCCAAAGTGTAA 1110 0.4829 MTQQNVMVSDANPGLNMAISASVSNSSIFTATAHKPPSAPSAYISIPRRKVLKNLEINAWVDSMRASSPTHAKSTPSLTEEHSSWILHHPSALDMFEQIIDASKGKQIVMFLDYDGTLSPIVNDPDRAFMSDEMRKAVRKLARCFPTAIVSGRCRDKVYSFVRLAELYYAGSHGMDIRGPTRCSKYNKESKAEAILFQPASEFLPMIDEVYQALVEKTKSTPGATVENNKFCVSVHYRCVDEKKWSELAHQVKSVLKEYPKLRLTQGRKVFEIRPAIKWDKGKALEFLLESLGFANCADVFPVYIGDDRTDEDAFKKLRERGQGLGILVSKFPRDTSASYSLQEPEEVKDFLQRLVEWKQASQRTCSKV 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5450g00070 369 Gene3D - 108 207 IPR023214 -
Pral5450g00070 369 Gene3D - 208 368 IPR023214 -
Pral5450g00070 369 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 30 365 IPR044651 GO:0004805|GO:0005992
Pral5450g00070 369 NCBIfam HAD-IIB family hydrolase 110 320 IPR006379 -
Pral5450g00070 369 FunFam Trehalose 6-phosphate phosphatase 206 365 - -
Pral5450g00070 369 FunFam Trehalose 6-phosphate phosphatase 108 195 - -
Pral5450g00070 369 SUPERFAMILY HAD-like 109 358 IPR036412 -
Pral5450g00070 369 CDD HAD_TPP 109 348 - -
Pral5450g00070 369 Pfam Trehalose-phosphatase 111 345 IPR003337 GO:0003824|GO:0005992
Pral5450g00070 369 NCBIfam trehalose-phosphatase 106 356 IPR003337 GO:0003824|GO:0005992
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5450g00070 Pral-Chr5450 316432 319124 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5450g00070 104 318 Trehalose Biosynthesis Gene Families AT1G70290 27.556 5.59e-10 59.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5450g00070 K01087 - gmx:100794430 600.897